| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1974 |
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| Symbol | |
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| ID | 4022456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2213099 |
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| End bp | 2214403 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637962167 |
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| Product | hypothetical protein |
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| Protein accession | YP_569110 |
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| Protein GI | 91976451 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4268] McrBC 5-methylcytosine restriction system component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00010435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.369682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGCGC GTCCTGAACC TGACGGAAAG ATCGTCTATA GCGTTCTCTC CCGACAGGCG
TTTGAACTAG ATCTGGCGGA TGTCACTTTG GACGGACGGC TTGAGATCCT ACCGCATGTC
GAAGAGAGGG GACTGCTCTT CCTGCAATTC AGGAAAAGCA AACTGATCGT AACGCCAGGT
GCTTACATTG GCCTTGTTCC ATTAACGCGT AAGATCGCGT TCGATGTCAG ACCAAAGTTT
CCCGTGAGCA ATCTTGCCCG CGTTATTGAC ACTTCCAAAC GACAGTTAAA TTCGATTCCT
GGCGCTGACC GGTCATACCT TGCGAACGAT CTGTCTGGCG GCAGCGTCTT GAATTTTCTC
GCCGCCAATC TTGTAGACGC GTTGCGTCCT ATCGCCGCAA GAGGTCTTCA CAAGGAGTAT
TCTTGCCGCT CGGAAACTAC AAGCCATCCC CGTGGACGCA TTGAGATTGC CGGCACGATG
CGTGGCTGGT CGCGCGGACA ATTCCACAAA GTGCAGGCGC AGCGATTCGA CCAAACCTCG
GACTTGCCAG TGAACCGGAT CCTAAAGGCA GCACTGGAAT CTGTCTTGAA GCTAATGTGG
CCTCATTCCA CCGAAAGTCG TCGGCTGATA GTGCGCGCCA ATGCGTCATT CCTGGAGTTT
CCCCAGCTCG TCGGTAGTTG TAAGCCGTTG GATTTGGCGG AGAGTCAGGC GATTCTGGCC
GCGAGAAGTC TTCCCGCCGA TCGCATTTAC TACTACCGCG CGATCGAGAT TGCGCTGCTC
ATACTGTCTA GCCGCGGCAT TTCTTTGCAG GAGGAGGGAG TCGATGTTCT CCTGGATAGT
TTTATCATCA ACTTCGACGA TTTGTTTGAG GAGTATCTCC GTCGCGTCCT GCAGGCGCGA
GCACCGAACC TTCTCAGCGT CAAGGACGGC AACTTCGAGG GGAAGCGCCA GCTATTCGAA
GATCGCAAAG ATCAGCCAGC GCAGCCCGAC GTGGTGCTTA CGTGGCAACC AACCAGCGTC
AATGTCGTCG GTGAGATAAA GTACAAGGAT AGGCCTTCGC GTGACGACAT CAATCAGGCT
ATCACTTATG CGCTCTGTTA CAATACCAAA TGCGCCGTTC TTATCCACCA ATGTCGATCG
GGCGAGTCGC GTGGATTGCG ACACCATGGT ACGATTCGTG GAATACGGTT AGAGAACTAT
GCCTTCGACC TCGGTGCCGC GAATCTTGAC GCGGAGGAGG AAGCTTTCGC TACGGCCATG
TTTGACTTAG TGCGCATGCA GCTATCGGAA AACGTGGCAG CTTAG
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| Protein sequence | MTARPEPDGK IVYSVLSRQA FELDLADVTL DGRLEILPHV EERGLLFLQF RKSKLIVTPG
AYIGLVPLTR KIAFDVRPKF PVSNLARVID TSKRQLNSIP GADRSYLAND LSGGSVLNFL
AANLVDALRP IAARGLHKEY SCRSETTSHP RGRIEIAGTM RGWSRGQFHK VQAQRFDQTS
DLPVNRILKA ALESVLKLMW PHSTESRRLI VRANASFLEF PQLVGSCKPL DLAESQAILA
ARSLPADRIY YYRAIEIALL ILSSRGISLQ EEGVDVLLDS FIINFDDLFE EYLRRVLQAR
APNLLSVKDG NFEGKRQLFE DRKDQPAQPD VVLTWQPTSV NVVGEIKYKD RPSRDDINQA
ITYALCYNTK CAVLIHQCRS GESRGLRHHG TIRGIRLENY AFDLGAANLD AEEEAFATAM
FDLVRMQLSE NVAA
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