Gene Mbar_A3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3270 
Symbol 
ID3627821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4201897 
End bp4203258 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content34% 
IMG OID637702106 
Producthypothetical protein 
Protein accessionYP_306731 
Protein GI73670716 
COG category[V] Defense mechanisms 
COG ID[COG4268] McrBC 5-methylcytosine restriction system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0179938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.335413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTA CATTCGAATA TGGCGAACAA TTTGAAGTTG ATGACCGCAA AGGCCTTGAA 
TCGTATTTAT GCTTTTTATG GCAAGAGTAT AAAAATATTT GGCCATCTCC GCCCGAAAAT
GAAAGTGAAA ATGAAAATAC AGATTTGGGG CCAGGTTCAA AATATCAGCC TTTCCTAAGT
TTTGATGGGA AAATGGCCAG GGCAAGGAAT TACATTGGTT TCATTAATTT TGAAAATTTT
AATATAGAGA TCTATCCCAA GATTTTTCAA AATGGACATG AAATAAGTAA AGAGCTAAAT
GAACCTAAAA TAAGTAAAGA GCTAATGCAT CGTCATTTAT TTTACTGGCT AAGTTATTGC
AAAAAAGTAA AATTCCCATT TAATCAGGCA TTTCTGGATA AGTTTGAACT CGAATTACCT
GAACTGCTTA TATATTTATT CGCAAGACAG ATACATGAAG TCATCAGCAC TCGACCTTTT
TCTGCTTATG AAGAAGTACA GGAAGCTCTG TTTACACCCA GAGGAAGAAT AAATTTTGAT
CGTTATGTAA CCAGAATCTC CTATGGAAAT TGTCACCTGA TTGATTGCGA CTACGAACCA
TTTGTATTTG ACAATTTATT GAACCGCATA ATCAAATACT GTACTCGATT ACTGCTTTCC
AAAGCAAGTA TCATTGAAAC ACAAAGAATT CTGAATGAAA TCATATTCAT GCTGGAAGAT
GTAGACGATC AGGTTTGTTT TGCACAACAG CTTCAGACTC TCCGGATACC CTCAATATAC
AGTGATTATG AAGAAATAAT TCAGATATGT GGCATGATAT TGGAAAATCA AGCTTATTCT
TGCGCAGAGT ATGAAATGAA AAACTGGAGC TTATTATTAC CAATGGAATA TATTTTTGAA
GATTTTATAG CCGGCTATGT TCAAAAGTAT TTTAGTGGCA CATTCAAAGT AGAACCTCAG
AAATCAGATC TTTACCTGCA TACCAATCCT AACACGTTCA ATCTTCAGCA TGACATCCTG
CTCACAAACA AAAAAACTGG GGAACAGATA ATTATTGATA CCAAGTATAA ACCCCGATGG
AACTTGGAAA AAAGCGATTC AAAGAAGGGA ATAGCTCAAT CCGATATGTA TCAAATGATC
AGTTATGCCT ACAGGCGAGG AACAAATAAA GTACTGCTTA TCTATCCAAA TACCTCTAAT
GAATTGGCAG AAGATCACAC GTTTTTGATT AATAAAGGTA CTAAGGATGA AACTATTAAC
ATCAAAGCAA TAGACGTGCC TTTCTGGTCA ATTACTGGTC ATCCATATGT TGAAGAAAAG
CTAAAAATTA AATTAAGAGA TGTATTATTT AATGAGTTAT GA
 
Protein sequence
MNTTFEYGEQ FEVDDRKGLE SYLCFLWQEY KNIWPSPPEN ESENENTDLG PGSKYQPFLS 
FDGKMARARN YIGFINFENF NIEIYPKIFQ NGHEISKELN EPKISKELMH RHLFYWLSYC
KKVKFPFNQA FLDKFELELP ELLIYLFARQ IHEVISTRPF SAYEEVQEAL FTPRGRINFD
RYVTRISYGN CHLIDCDYEP FVFDNLLNRI IKYCTRLLLS KASIIETQRI LNEIIFMLED
VDDQVCFAQQ LQTLRIPSIY SDYEEIIQIC GMILENQAYS CAEYEMKNWS LLLPMEYIFE
DFIAGYVQKY FSGTFKVEPQ KSDLYLHTNP NTFNLQHDIL LTNKKTGEQI IIDTKYKPRW
NLEKSDSKKG IAQSDMYQMI SYAYRRGTNK VLLIYPNTSN ELAEDHTFLI NKGTKDETIN
IKAIDVPFWS ITGHPYVEEK LKIKLRDVLF NEL