18 homologs were found in PanDaTox collection
for query gene Msil_0942 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011666  Msil_0942  hypothetical protein  100 
 
 
248 aa  500  1e-140  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.000599869 
 
 
-
 
NC_002977  MCA2963  hypothetical protein  42.71 
 
 
230 aa  132  6e-30  Methylococcus capsulatus str. Bath  Bacteria  normal  0.40787  n/a   
 
 
-
 
NC_010511  M446_2032  hypothetical protein  36.59 
 
 
255 aa  93.2  4e-18  Methylobacterium sp. 4-46  Bacteria  decreased coverage  0.00792656  normal  0.0108899 
 
 
-
 
NC_011894  Mnod_1783  hypothetical protein  38.53 
 
 
260 aa  88.6  9e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6928  protein of unknown function DUF336  29.12 
 
 
144 aa  58.5  0.00000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0574265  n/a   
 
 
-
 
NC_008577  Shewana3_1276  hypothetical protein  28.74 
 
 
135 aa  57.8  0.0000002  Shewanella sp. ANA-3  Bacteria  normal  0.764768  normal 
 
 
-
 
NC_010511  M446_6273  hypothetical protein  30.13 
 
 
144 aa  57  0.0000003  Methylobacterium sp. 4-46  Bacteria  normal  0.0693842  normal  0.24396 
 
 
-
 
NC_010172  Mext_4158  hypothetical protein  30.72 
 
 
144 aa  55.8  0.0000007  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.693386 
 
 
-
 
NC_011757  Mchl_4527  protein of unknown function DUF336  30.72 
 
 
144 aa  55.8  0.0000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4389  hypothetical protein  28.85 
 
 
144 aa  53.5  0.000003  Methylobacterium radiotolerans JCM 2831  Bacteria  decreased coverage  0.00597448  normal  0.831854 
 
 
-
 
NC_010725  Mpop_4670  protein of unknown function DUF336  29.19 
 
 
144 aa  52.4  0.000007  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4600  protein of unknown function DUF336  29.71 
 
 
134 aa  51.2  0.00002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1777  protein of unknown function DUF336  28.67 
 
 
144 aa  49.7  0.00004  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_1444  hypothetical protein  27.59 
 
 
144 aa  48.1  0.0001  Methylobacillus flagellatus KT  Bacteria  normal  0.578879  normal  0.348542 
 
 
-
 
NC_008009  Acid345_2769  hypothetical protein  26.67 
 
 
133 aa  45.8  0.0006  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.816644  normal 
 
 
-
 
NC_010320  Teth514_1943  ATP--cobalamin adenosyltransferase  33.71 
 
 
333 aa  43.9  0.002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7748  protein of unknown function DUF336  30.53 
 
 
133 aa  42.4  0.006  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_0677  protein of unknown function DUF336  27.97 
 
 
139 aa  42.7  0.006  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
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