Gene Slin_4600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4600 
Symbol 
ID8728364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5582842 
End bp5583246 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF336 
Protein accessionYP_003389377 
Protein GI284039447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTA CGTTAGCACA AGCCGAAACA GCTGTACAGG CAGCCAAAGT TAAAGCGACA 
GAACTAGGAA CTCTGATGAA CATTGCCATC GTCGACACAG GAGCCAACCT CACCGCCTTT
GCCCACATGG ATGGTGCCTG GCTGGGTTCG ATTGATATTT CGCAGAAGAA AGCCAGAACC
GCCCGGTATT TCGATATGCC AACGGGCGAA ATTGGCAAAC TATCGCAACC GGGTGGTTCG
CTCTACAACA TAGAACACTC CAACGGTGGG CTCATTACCT TTCCCGGCGG CATACCGATC
AAAAATGCAG ACGGTGACAT CATTGGTGCC ATTGGCGTGT CCGGCAGCAC CGTCGAGAAT
GACCATATCG TTGCCCAGGC GGGCGTTGAC GCCCTCGCCC AGTAA
 
Protein sequence
MSITLAQAET AVQAAKVKAT ELGTLMNIAI VDTGANLTAF AHMDGAWLGS IDISQKKART 
ARYFDMPTGE IGKLSQPGGS LYNIEHSNGG LITFPGGIPI KNADGDIIGA IGVSGSTVEN
DHIVAQAGVD ALAQ