8 homologs were found in PanDaTox collection
for query gene Msed_1227 on replicon NC_009440
Organism: Metallosphaera sedula DSM 5348



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009440  Msed_1227  TM helix repeat-containing protein  100 
 
 		 254 aa  487  1e-137  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
CP001800  Ssol_0005  Conserved TM helix repeat-containing protein  51.01 
 
 		 281 aa  215  7e-55  Sulfolobus solfataricus 98/2  Archaea  normal  0.152576  n/a   
 
 
-
 
NC_009954  Cmaq_0481  TM helix repeat-containing protein  42.31 
 
 		 266 aa  140  3e-32  Caldivirga maquilingensis IC-167  Archaea  normal  0.087662  hitchhiker  0.00285155 
 
 
-
 
NC_009073  Pcal_0558  TM helix repeat-containing protein  29.49 
 
 		 281 aa  77  0.0000000000003  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_009376  Pars_0737  TM helix repeat-containing protein  31.91 
 
 		 279 aa  73.9  0.000000000003  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.36808  normal  0.444649 
 
 
-
 
NC_008701  Pisl_1736  TM helix repeat-containing protein  31.55 
 
 		 279 aa  70.5  0.00000000002  Pyrobaculum islandicum DSM 4184  Archaea  normal  1  normal  1 
 
 
-
 
NC_010525  Tneu_0752  TM helix repeat-containing protein  31.02 
 
 		 279 aa  69.7  0.00000000004  Thermoproteus neutrophilus V24Sta  Archaea  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5911  TM helix repeat-containing protein  23.65 
 
 		 279 aa  43.9  0.003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>