Gene Pisl_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1736 
Symbol 
ID4616409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1572392 
End bp1573231 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content52% 
IMG OID639784819 
ProductTM helix repeat-containing protein 
Protein accessionYP_931230 
Protein GI119873223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTGG TGTTGAACTG GGACCAACTT TGGCAGGATT TCATCACCTA TGGCATACAG 
GGCGTGATTG CGGTGTTGAT AGTCGTTGTG GCTTGGGCAG TGGGCTCTCT TGTAGGTAAA
GCCGTGAATA GATTAATTGA AAAGACGGGG TTGGAGAGGG CGTTTGATCG GACTGATGTA
GGTAAGGCCT TCAGGGCGGC TGGGATCGAC CTTTCTAACC TCATCGGCAT GTTGATTACG
GCTTTTGTAG TGGTGATTGG TATCGTTATT GCCCTCGGCT ATCTGAGGAT TAGTGGAGAG
GCAGGGGTTC TGGTAGCTCA AGTGGCGCAG TATCTCCCGA GGCTCATAGG GGGTATCATC
CTGCTTACGG CTGGCTTAAT TCTCGTCGCT CTTTTGACAG ACTACATAGG CAAGTTGCTC
GTAAGTCTGT TTCCAAAACA GTTTGTGGAA ATCGGCGAGA TGTTGAGGAA TCTGCTTCTG
ATAGGCTTGA TCGCGCTTGT TGTATCTATA GCGCTTGACT TGATGCTGTT CACCGGGCCT
CTGGTGTATC CGCTTATTCT AGGCACTGTC ATTATTGGGG CCGGCATCTT CATTGGCCAC
ACTATTGTGA GGAATATCGT GGAAGACCAC CCCGAGTTTG CCAACGCGGC ACCCTATGCT
AAATTCCTCC TGTATCTGAT ATTCCTGATG GTTGGGCTTG GGGCTATATT TGCCAACTTC
CCCGCCACCG CGCAGGTGGT GCAGAACGTG GCGTGGGGGG TGGCTATCGC GGTGGGTATC
CTCCTGGCGC CTGTGGTGTA CATGCTTGCT AAACGGATGG CGAAGGAGGT AAAGGACTAG
 
Protein sequence
MYLVLNWDQL WQDFITYGIQ GVIAVLIVVV AWAVGSLVGK AVNRLIEKTG LERAFDRTDV 
GKAFRAAGID LSNLIGMLIT AFVVVIGIVI ALGYLRISGE AGVLVAQVAQ YLPRLIGGII
LLTAGLILVA LLTDYIGKLL VSLFPKQFVE IGEMLRNLLL IGLIALVVSI ALDLMLFTGP
LVYPLILGTV IIGAGIFIGH TIVRNIVEDH PEFANAAPYA KFLLYLIFLM VGLGAIFANF
PATAQVVQNV AWGVAIAVGI LLAPVVYMLA KRMAKEVKD