| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1227 |
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| Symbol | |
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| ID | 5103841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1203684 |
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| End bp | 1204448 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507119 |
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| Product | TM helix repeat-containing protein |
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| Protein accession | YP_001191312 |
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| Protein GI | 146303996 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATAG CCCAAGCTCA AACAATATCC CAATCTCTAA GTCAATTAGG AACAGAATTT
GTTAATGCCA TACCCTCGAT CATTTTATTT GTTATCATCG TTATAATAGA ATATGTCGTA
GCCCAGATAG TCGCAGGCGT GATAAGGAGG ATACTACCGA GAATAATGAC CGGACCGTCT
TCTGCCATTA GCACTGACCT AGTTCCAGGC GTTGTGAAGG CGCTAATAAT ACTGTTGGCG
TTAGCAGTTG CGTTTTCGGT ACTTAACCTA GGACCAGCAA CGGTATACAT TGCTGAGGTG
GCGAGATACT TACCAGCGCT TGCGGGAGCA ATTCTCCTTC TAACGCTGGG ACTTTCCCTG
GTCAACATCG TTATCGACTA TATGATGAAG CAAATGAACA CAGGTGACCC GTTCGTTCAG
ACCATTTTCG CGGTTCTGAG GTTCGGAATA TACGCCGTGA TTATCACCGT CGCTGCAACC
CTCGCCATAT TTTACTGGAT ACCGAGCATT AGCCCCTACC TCTTCTACGA CATTATACTA
GCGTCAGTTA TCCTGATGTT CGCCTTCACG ATCACGGACA AGGCCTTCGA ATCCATCTCC
AGGTCTGATC CAAACGCTAC CACGTTAACG TCATACGGGA AGTTCGTCCT CTACACTATC
TTCATACTAA TTGCAGTGGC GATCATAACT CAGCCCTTCG CTAACGTGTC AGGTGTGCTC
CAGAGAGTGT CCGGAGCGAG AAAAATTCAG CTAATAATTA TTTGA
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| Protein sequence | MIIAQAQTIS QSLSQLGTEF VNAIPSIILF VIIVIIEYVV AQIVAGVIRR ILPRIMTGPS
SAISTDLVPG VVKALIILLA LAVAFSVLNL GPATVYIAEV ARYLPALAGA ILLLTLGLSL
VNIVIDYMMK QMNTGDPFVQ TIFAVLRFGI YAVIITVAAT LAIFYWIPSI SPYLFYDIIL
ASVILMFAFT ITDKAFESIS RSDPNATTLT SYGKFVLYTI FILIAVAIIT QPFANVSGVL
QRVSGARKIQ LIII
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