14 homologs were found in PanDaTox collection
for query gene Lferr_0341 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011206  Lferr_0341  hypothetical protein  100 
 
 		 105 aa  212  9.999999999999999e-55  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.516535  normal  0.750454 
 
 
-
 
NC_011761  AFE_0162  hypothetical protein  98.75 
 
 		 80 aa  160  5.0000000000000005e-39  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_4356  anti-sigma-factor antagonist  42.37 
 
 		 99 aa  50.4  0.000009  Serratia proteamaculans 568  Bacteria  normal  0.36645  normal  0.0117925 
 
 
-
 
NC_011901  Tgr7_0741  anti-sigma-factor antagonist  39.66 
 
 		 111 aa  49.7  0.00001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.360967  n/a   
 
 
-
 
NC_012912  Dd1591_3804  anti-sigma-factor antagonist  40 
 
 		 97 aa  50.1  0.00001  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.002729  n/a   
 
 
-
 
NC_009708  YpsIP31758_0452  putative anti-anti-sigma factor  38.98 
 
 		 100 aa  43.1  0.001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0606923  n/a   
 
 
-
 
NC_010159  YpAngola_A1142  putative anti-anti-sigma factor  38.98 
 
 		 100 aa  43.1  0.001  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_0516  putative anti-sigma B factor antagonist  38.98 
 
 		 100 aa  43.1  0.001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.144727  n/a   
 
 
-
 
NC_012791  Vapar_1159  sulfate transporter/antisigma-factor antagonist STAS  41.07 
 
 		 90 aa  43.5  0.001  Variovorax paradoxus S110  Bacteria  normal  0.306172  n/a   
 
 
-
 
NC_012856  Rpic12D_2888  putative signal peptide protein  42.37 
 
 		 103 aa  42  0.003  Ralstonia pickettii 12D  Bacteria  normal  0.381064  normal  0.196397 
 
 
-
 
NC_008740  Maqu_2705  NTP binding protein  41.82 
 
 		 105 aa  41.6  0.004  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_007973  Rmet_3254  sulfate transporter/antisigma-factor antagonist STAS  43.1 
 
 		 98 aa  40.8  0.006  Cupriavidus metallidurans CH34  Bacteria  normal  0.200949  normal  1 
 
 
-
 
NC_003295  RSc2957  putative signal peptide protein  37.84 
 
 		 115 aa  40.8  0.007  Ralstonia solanacearum GMI1000  Bacteria  normal  0.516221  normal  1 
 
 
-
 
NC_012917  PC1_0285  hypothetical protein  39.66 
 
 		 98 aa  40.8  0.007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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