Gene Lferr_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0341 
Symbol 
ID6876292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp321345 
End bp321662 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content63% 
IMG OID642788214 
Producthypothetical protein 
Protein accessionYP_002218802 
Protein GI198282481 
COG category[R] General function prediction only 
COG ID[COG3113] Predicted NTP binding protein (contains STAS domain) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.516535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.750454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCAG CGAACTCCTG GGAGCGGCGG ACGGTCGACG GTGCTGGCTG GCTGTTCCTC 
CGGGGGGACT GGCGGGTGGC ACAGTTGGAT AAGGCCCTTC AGTTCTTTTC GTGGGCGAAG
GACGGTCGGG ATTGTACGGA GATTTCCGTC GCGGAGCTGG ATGCGGCAGA CAGCGCCACC
CTCGCCGTGC TGTTGGAGTG GACTCAGCAG GCCGCCGGGC GTGGCGTTCC GCTGCGTATT
CATGGGGCAT CTCCCAAGCT GCGGGAACTG GCAAGCTTGT ACAGTCTGCA GGATATTCTG
CCCCTTTGCC ATGATTGA
 
Protein sequence
MSAANSWERR TVDGAGWLFL RGDWRVAQLD KALQFFSWAK DGRDCTEISV AELDAADSAT 
LAVLLEWTQQ AAGRGVPLRI HGASPKLREL ASLYSLQDIL PLCHD