24 homologs were found in PanDaTox collection
for query gene HS_0678 on replicon NC_008309
Organism: Haemophilus somnus 129PT



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008309  HS_0678  PTS system, glucitol/sorbitol-specific IIBC component  100 
 
 
331 aa  658    Haemophilus somnus 129PT  Bacteria  hitchhiker  0.0000916157  n/a   
 
 
-
 
NC_009832  Spro_3570  PTS system, glucitol/sorbitol-specific, IIBC subunit  78.83 
 
 
326 aa  529  1e-149  Serratia proteamaculans 568  Bacteria  normal  normal  0.944812 
 
 
-
 
NC_011205  SeD_A3142  PTS system glucitol/sorbitol-specific transporter subunit IIB  79.75 
 
 
323 aa  525  1e-148  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0013552 
 
 
-
 
NC_011149  SeAg_B2953  glucitol/sorbitol-specific phosphotransferase enzyme iib component  79.75 
 
 
323 aa  525  1e-148  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2984  glucitol/sorbitol-specific phosphotransferase enzyme iib component  79.75 
 
 
323 aa  525  1e-148  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.00248286 
 
 
-
 
NC_011083  SeHA_C3019  glucitol/sorbitol-specific phosphotransferase enzyme iib component  79.75 
 
 
323 aa  525  1e-148  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.824211  hitchhiker  0.00000475324 
 
 
-
 
NC_011080  SNSL254_A3035  glucitol/sorbitol-specific phosphotransferase enzyme iib component  79.75 
 
 
323 aa  525  1e-148  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.673826  hitchhiker  0.00564153 
 
 
-
 
NC_012892  B21_02518  hypothetical protein  77.61 
 
 
319 aa  517  1e-146  Escherichia coli BL21  Bacteria  normal  0.660273  n/a   
 
 
-
 
CP001509  ECD_02553  glucitol/sorbitol-specific enzyme IIB component of PTS  77.61 
 
 
319 aa  517  1e-146  Escherichia coli BL21(DE3)  Bacteria  normal  0.516594  n/a   
 
 
-
 
NC_010498  EcSMS35_2826  PTS system, glucitol/sorbitol-specific, IIB component  77.61 
 
 
319 aa  516  1.0000000000000001e-145  Escherichia coli SMS-3-5  Bacteria  normal  0.204454  hitchhiker  0.0000775819 
 
 
-
 
NC_010658  SbBS512_E3174  PTS system, glucitol/sorbitol-specific, IIB component  77.61 
 
 
319 aa  517  1.0000000000000001e-145  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1009  PTS system, glucitol/sorbitol-specific, IIBC subunit  77.61 
 
 
319 aa  515  1.0000000000000001e-145  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.000000525886 
 
 
-
 
NC_009801  EcE24377A_2987  PTS system, glucitol/sorbitol-specific, IIB component  77.61 
 
 
319 aa  517  1.0000000000000001e-145  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2839  PTS system, glucitol/sorbitol-specific, IIB component  77.61 
 
 
319 aa  515  1.0000000000000001e-145  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0986  PTS system, glucitol/sorbitol-specific, IIBC subunit  77.61 
 
 
319 aa  517  1.0000000000000001e-145  Escherichia coli DH1  Bacteria  normal  0.337304  n/a   
 
 
-
 
NC_013517  Sterm_1064  PTS system, glucitol/sorbitol-specific, IIBC subunit  60.91 
 
 
333 aa  385  1e-106  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_4110  protein-N(pi)-phosphohistidine--sugar phosphotransferase  50.61 
 
 
327 aa  313  2.9999999999999996e-84  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.603955  n/a   
 
 
-
 
NC_013517  Sterm_3331  Protein-N(pi)-phosphohistidine--sugar phosphotransferase  49.7 
 
 
330 aa  308  1.0000000000000001e-82  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.624452  n/a   
 
 
-
 
NC_013517  Sterm_3775  Protein-N(pi)-phosphohistidine--sugar phosphotransferase  50.15 
 
 
336 aa  302  5.000000000000001e-81  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000179423  n/a   
 
 
-
 
NC_008786  Veis_2220  protein-N(pi)-phosphohistidine--sugar phosphotransferase  49.35 
 
 
334 aa  283  3.0000000000000004e-75  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.447451 
 
 
-
 
NC_011083  SeHA_C2926  glucitol/sorbitol-specific phosphotransferase enzyme iib component  47.48 
 
 
326 aa  273  4.0000000000000004e-72  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.51564  hitchhiker  0.0000393385 
 
 
-
 
NC_012880  Dd703_2153  Protein-N(pi)-phosphohistidine--sugar phosphotransferase  61.34 
 
 
572 aa  167  2e-40  Dickeya dadantii Ech703  Bacteria  normal  0.819052  n/a   
 
 
-
 
NC_013421  Pecwa_0986  Protein-N(pi)-phosphohistidine--sugar phosphotransferase  62.39 
 
 
572 aa  162  1e-38  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0750  Protein-N(pi)-phosphohistidine--sugar phosphotransferase  62.39 
 
 
572 aa  160  3e-38  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>