| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2826 |
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| Symbol | srlE |
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| ID | 6145871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2901618 |
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| End bp | 2902577 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617695 |
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| Product | PTS system, glucitol/sorbitol-specific, IIB component |
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| Protein accession | YP_001744850 |
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| Protein GI | 170681652 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3732] Phosphotransferase system sorbitol-specific component IIBC |
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| TIGRFAM ID | [TIGR00825] PTS system, glucitol/sorbitol-specific, IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.204454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0000775819 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCGTA TTCGGATCGA AAAAGGAACG GGTGGCTGGG GCGGCCCGCT TGAGCTGGAA
GCCAAACCGG GAAAAAAAAT CGTCTATATC ACCGCCGGTA CCCGGCCTGC GATTGTTGAC
AAACTGGCAC AGCTTACTGG CTGGCAGGCT ATTGACGGAT TTAAAGAAGG TGAACCCGCG
GAGGCGGAAA TTGGTGTCGC GGTAATCGAC TGTGGCGGCA CATTACGCTG TGGCATCTAT
CCGAAACGGC GTATTCCCAC CATTAATATC CACTCGACGG GCAAGTCCGG CCCGCTGGCG
CAGTACATTG TGGAAGATAT TTATGTCTCT GGCGTAAAAG AAGAAAACAT CACTGTAGTG
GGTGATGCGA CACCACAACC CTCTTCCGTG GGCCGTGACT ATGACACCAG CAAGAAAATC
ACCGAACAAA GCGATGGTTT ACTGGCGAAG GTGGGAATGG GTATGGGTTC TGCCGTTGCC
GTGTTGTTTC AATCTGGTCG TGACACCATC GACACTGTAT TAAAAACCAT TCTGCCGTTT
ATGGCGTTCG TCTCGGCGCT TATCGGCATC ATTATGGCTT CTGGCCTTGG TGACTGGATT
GCCCACGGTC TTGCTCCGCT GGCGAGCCAT CCACTGGGTC TGGTCATGTT GGCGCTCATC
TGCTCCTTCC CGCTGCTTTC ACCTTTCCTC GGCCCAGGCG CAGTTATCGC GCAGGTTATC
GGCGTATTGA TTGGTGTGCA GATTGGTCTC GGCAATATTC CGCCGCATCT GGCTTTACCT
GCACTGTTTG CCATCAACGC GCAGGCGGCC TGCGACTTCA TCCCGGTCGG TTTGTCGCTG
GCGGAAGCTC GTCAGGACAC GGTTCGCGTC GGTGTCCCTT CTGTTCTGGT GAGCCGCTTT
TTAACCGGCG CGCCAACTGT ACTGATCGCC TGGTTTGTCT CCGGTTTTAT CTATCAATAG
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| Protein sequence | MTRIRIEKGT GGWGGPLELE AKPGKKIVYI TAGTRPAIVD KLAQLTGWQA IDGFKEGEPA
EAEIGVAVID CGGTLRCGIY PKRRIPTINI HSTGKSGPLA QYIVEDIYVS GVKEENITVV
GDATPQPSSV GRDYDTSKKI TEQSDGLLAK VGMGMGSAVA VLFQSGRDTI DTVLKTILPF
MAFVSALIGI IMASGLGDWI AHGLAPLASH PLGLVMLALI CSFPLLSPFL GPGAVIAQVI
GVLIGVQIGL GNIPPHLALP ALFAINAQAA CDFIPVGLSL AEARQDTVRV GVPSVLVSRF
LTGAPTVLIA WFVSGFIYQ
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