| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0678 |
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| Symbol | srlE |
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| ID | 4240166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 723482 |
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| End bp | 724477 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638104230 |
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| Product | PTS system, glucitol/sorbitol-specific IIBC component |
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| Protein accession | YP_718890 |
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| Protein GI | 113460823 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3732] Phosphotransferase system sorbitol-specific component IIBC |
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| TIGRFAM ID | [TIGR00825] PTS system, glucitol/sorbitol-specific, IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000916157 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA AAGCAGTTTA TATTGAAAAA GGTAACGGTG GCTGGGGTGG TCCATTAACA
TTACCTATTA TTGAAGGCAA AAAAATACTT TATATGACCG GAGGCACTCG TCCTGCTATT
GTGAATAAAT TGGTGGAATT AACTGGCTGG GAAGCAGTAG ATGGTTTTAA AGAAGGCGAA
CCGCCAGCAG AAGAAATTGG AATTGCAATT GTTGACTGTG GTGGTGTATT ACGTTGTGGG
CTTTACCCAA AACGTCGCAT TCCAACTATT AATATTCACG CAACCGGCAA ATCAGGACCT
TTAGCAGAAT TTATTGTTGA AGATATTTAT GTTTCTGCCG TAAAAGAAAA TAATATTTCG
TTAATTGATG TGGATGCCGC AGCCCTTTCT GTCATATCTG AAGAAAAAAT TGCTTCATCA
ACTACCGCAA AAGAGTATGA TTCAAGTAAA AAAATCACCG AACAAAGTAA TGGTTTATTG
GCAAAAATAG GTATGGGAAT GGGTTCTGTC GCCGCACTCT TTTTCCAAGC CGGACGTGAT
ACTATTGATA CAGTCCTGAA AACCATTTTA CCGTTTATGG CATTCGTTTC CGCCTTGATT
GGAATCATTA TTGCTTCCGG TTTGGGGGAT TTAATTGCTC ATGGTTTAAC ACCGCTTGCA
AATAGCCCAC TCGGTTTAGT TACTCTTGCG TTAATTTGTT CTTTCCCACT ACTCTCTCCA
TTCTTAGGTC CCGGAGCTGT TATTGCTCAA GTTATCGGTG TATTAGTAGG CACACAAATC
GGTTTAGGGA ACATTCCACC ACATTTAGCC CTGCCGGCAC TTTTTGCCAT CAATGCTCAA
GCCGCTTGTG ATTTCATTCC CGTGGGGCTT TCAATGGCAG AAGCGAAACA AGATACTGTG
CGAGTGGGCG TACCTTCTGT ATTAGTCAGT CGTTTTTTGA CTGGTGCACC GACAGTATTA
ATTGCATGGG CGGTATCTGC ATTCATTTAT CAGTAA
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| Protein sequence | MSNKAVYIEK GNGGWGGPLT LPIIEGKKIL YMTGGTRPAI VNKLVELTGW EAVDGFKEGE
PPAEEIGIAI VDCGGVLRCG LYPKRRIPTI NIHATGKSGP LAEFIVEDIY VSAVKENNIS
LIDVDAAALS VISEEKIASS TTAKEYDSSK KITEQSNGLL AKIGMGMGSV AALFFQAGRD
TIDTVLKTIL PFMAFVSALI GIIIASGLGD LIAHGLTPLA NSPLGLVTLA LICSFPLLSP
FLGPGAVIAQ VIGVLVGTQI GLGNIPPHLA LPALFAINAQ AACDFIPVGL SMAEAKQDTV
RVGVPSVLVS RFLTGAPTVL IAWAVSAFIY Q
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