| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3174 |
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| Symbol | srlE |
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| ID | 6272378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2965478 |
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| End bp | 2966437 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641727089 |
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| Product | PTS system, glucitol/sorbitol-specific, IIB component |
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| Protein accession | YP_001881548 |
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| Protein GI | 187732690 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3732] Phosphotransferase system sorbitol-specific component IIBC |
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| TIGRFAM ID | [TIGR00825] PTS system, glucitol/sorbitol-specific, IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGTA TTCGGATCGA AAAAGGAACG GGTGGCTGGG GCGGCCCGCT TGAGCTGGAA
GCCACGCCGG GCAAAAAAAT CGTCTATATC ACCGCCGGTA CCCGGCCTGC GATTGTTGAC
AAACTGGCAC AACTTACTGG CTGGCAGGCT ATTGACGGAT TTAAAGAAGG TGAACCCGCG
GAGGCGGAAA TTGGTGTCGC GGTAATCGAC TGTGGCGGCA CATTACGCTG CGGCATCTAT
CCGAAACGAC GTATTCCCAC CATTAATATC CACTCGACGG GCAAGTCCGG TCCGCTGGCG
CAGTACATTG TGGAAGATAT TTATGTCTCT GGCGTAAAAG AAGAAAACAT CACTGTAGTG
GGTGATGCGA CACCACAACC CTCTTCCGTG GGACGTGACT ATGACACCAG TAAGAAAATC
ACCGAACAAA GCGATGGTTT ACTGGCGAAG GTGGGAATGG GCATGGGGTC CGCCGTTGCG
GTGCTGTTTC AATCTGGTCG TGACACCATC GACACTGTAT TAAAAACCAT TCTGCCGTTT
ATGGCATTCG TCTCGGCGCT CATTGGCATC ATTATGGCTT CTGGCCTTGG TGACTGGATT
GCCCACGGTC TTGCTCCGCT GGCGAGCCAT CCACTGGGTC TGGTCATGCT GGCGCTCATC
TGCTCCTTCC CACTGCTTTC ACCTTTCCTC GGCCCAGGCG CAGTTATCGC ACAGGTTATC
GGCGTATTGA TTGGCGTGCA GATTGGTCTC GGCAATATTC CGCCGCATCT GGCTTTACCG
GCACTGTTTG CCATCAACGC GCAGGCGGCC TGCGACTTCA TCCCGGTCGG TTTGTCGCTG
GCGGAAGCCC GTCAGGACAC GGTTCGCGTC GGTGTCCCTT CTGTACTGGT GAGCCGCTTT
TTAACCGGCG CACCGACTGT ACTGATCGCC TGGTTTGTCT CCGGTTTTAT CTATCAATAG
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| Protein sequence | MTRIRIEKGT GGWGGPLELE ATPGKKIVYI TAGTRPAIVD KLAQLTGWQA IDGFKEGEPA
EAEIGVAVID CGGTLRCGIY PKRRIPTINI HSTGKSGPLA QYIVEDIYVS GVKEENITVV
GDATPQPSSV GRDYDTSKKI TEQSDGLLAK VGMGMGSAVA VLFQSGRDTI DTVLKTILPF
MAFVSALIGI IMASGLGDWI AHGLAPLASH PLGLVMLALI CSFPLLSPFL GPGAVIAQVI
GVLIGVQIGL GNIPPHLALP ALFAINAQAA CDFIPVGLSL AEARQDTVRV GVPSVLVSRF
LTGAPTVLIA WFVSGFIYQ
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