More than 300 homologs were found in PanDaTox collection
for query gene HMPREF0424_1083 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013721  HMPREF0424_1083  glycosyltransferase, group 4 family  100 
 
 
367 aa  721    Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_1898  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase  79.78 
 
 
427 aa  602  1.0000000000000001e-171  Bifidobacterium longum DJO10A  Bacteria  normal  0.18974  n/a   
 
 
-
 
NC_013521  Sked_09950  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase  50.95 
 
 
375 aa  370  1e-101  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1782  glycosyl transferase family 4  48.28 
 
 
382 aa  352  4e-96  Jonesia denitrificans DSM 20603  Bacteria  normal  0.219636  normal 
 
 
-
 
NC_014151  Cfla_1064  Glycosyl transferase, family 4, conserved region  47.67 
 
 
370 aa  311  9e-84  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1261  glycosyl transferase family 4  46.58 
 
 
394 aa  304  2.0000000000000002e-81  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.644979  normal  0.0359873 
 
 
-
 
NC_012669  Bcav_1290  glycosyl transferase family 4  48.57 
 
 
372 aa  303  3.0000000000000004e-81  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.388977 
 
 
-
 
NC_013530  Xcel_2456  glycosyl transferase family 4  47.11 
 
 
399 aa  294  2e-78  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_19210  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase  50.15 
 
 
377 aa  281  1e-74  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0327  Glycosyl transferase, family 4, conserved region  43.99 
 
 
387 aa  270  2.9999999999999997e-71  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.188042 
 
 
-
 
NC_008578  Acel_0644  glycosyl transferase family protein  43.5 
 
 
369 aa  268  8.999999999999999e-71  Acidothermus cellulolyticus 11B  Bacteria  normal  0.666126  normal  0.192967 
 
 
-
 
NC_008699  Noca_1754  glycosyl transferase family protein  43.28 
 
 
394 aa  264  2e-69  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1209  glycosyl transferase family 4  38.95 
 
 
449 aa  259  4e-68  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_18290  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase  48.2 
 
 
368 aa  254  2.0000000000000002e-66  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0723991  normal 
 
 
-
 
NC_013595  Sros_1662  glycosyltransferase  41.9 
 
 
425 aa  250  3e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2614  glycosyl transferase family protein  42.08 
 
 
386 aa  247  2e-64  Arthrobacter sp. FB24  Bacteria  normal  0.143925  n/a   
 
 
-
 
NC_013757  Gobs_4145  Glycosyl transferase, family 4, conserved region  43.58 
 
 
416 aa  246  3e-64  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2347  glycosyl transferase family 4  41.74 
 
 
370 aa  245  9.999999999999999e-64  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000273698 
 
 
-
 
NC_009565  TBFG_11329  undecapaprenyl-phosphate alpha-N-acetylglucosaminyltransferase rfe  42.37 
 
 
404 aa  238  2e-61  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1014  glycosyl transferase family protein  42.86 
 
 
369 aa  237  2e-61  Frankia sp. EAN1pec  Bacteria  normal  0.258485  normal 
 
 
-
 
NC_007777  Francci3_3716  glycosyl transferase family protein  40.22 
 
 
369 aa  236  4e-61  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1913  Glycosyl transferase, family 4, conserved region  39.1 
 
 
403 aa  236  5.0000000000000005e-61  Gordonia bronchialis DSM 43247  Bacteria  normal  0.470989  n/a   
 
 
-
 
NC_008726  Mvan_4336  glycosyl transferase family protein  42.42 
 
 
405 aa  234  1.0000000000000001e-60  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.713861  normal  0.123389 
 
 
-
 
NC_013093  Amir_6145  glycosyl transferase family 4  40.27 
 
 
389 aa  232  6e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.439375  n/a   
 
 
-
 
NC_013235  Namu_2116  glycosyl transferase family 4  43.45 
 
 
391 aa  232  8.000000000000001e-60  Nakamurella multipartita DSM 44233  Bacteria  normal  0.239722  normal  0.0546819 
 
 
-
 
NC_014165  Tbis_0891  family 4 glycosyl transferase  40.77 
 
 
402 aa  231  1e-59  Thermobispora bispora DSM 43833  Bacteria  normal  0.871792  normal 
 
 
-
 
NC_013510  Tcur_3925  glycosyl transferase family 4  41.37 
 
 
383 aa  231  1e-59  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2416  putative teichoic acid linkage unit synthesis (synthesis of undecaprenylpyrophosphate-N-aetylglucosamine )  44.87 
 
 
387 aa  231  2e-59  Thermobifida fusca YX  Bacteria  normal  0.484516  n/a   
 
 
-
 
NC_009077  Mjls_3870  glycosyl transferase family protein  42.81 
 
 
399 aa  230  2e-59  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0269562 
 
 
-
 
NC_008146  Mmcs_3884  glycosyl transferase family protein  42.81 
 
 
399 aa  230  2e-59  Mycobacterium sp. MCS  Bacteria  normal  0.079088  n/a   
 
 
-
 
NC_008705  Mkms_3958  glycosyl transferase family protein  42.81 
 
 
399 aa  230  2e-59  Mycobacterium sp. KMS  Bacteria  normal  normal  0.2919 
 
 
-
 
NC_012803  Mlut_08100  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase  39.57 
 
 
379 aa  229  7e-59  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1804  glycosyl transferase family 4  36.94 
 
 
367 aa  202  8e-51  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_29630  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase  38.01 
 
 
396 aa  202  9.999999999999999e-51  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2310  glycosyl transferase family protein  39.5 
 
 
405 aa  199  7e-50  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.440148 
 
 
-
 
NC_014158  Tpau_1247  Glycosyl transferase, family 4, conserved region  35.51 
 
 
405 aa  194  2e-48  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.910947  n/a   
 
 
-
 
NC_009632  SaurJH1_0788  glycosyl transferase family protein  35.13 
 
 
351 aa  172  1e-41  Staphylococcus aureus subsp. aureus JH1  Bacteria  decreased coverage  0.000170837  n/a   
 
 
-
 
NC_009487  SaurJH9_0771  glycosyl transferase family protein  35.13 
 
 
351 aa  172  1e-41  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00610763  n/a   
 
 
-
 
NC_012793  GWCH70_3047  glycosyl transferase family 4  35.51 
 
 
354 aa  167  2e-40  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0525  Phospho-N-acetylmuramoyl-pentapeptide- transferase  35.52 
 
 
406 aa  162  1e-38  Atopobium parvulum DSM 20469  Bacteria  hitchhiker  0.0000346321  unclonable  0.0000000470096 
 
 
-
 
NC_009674  Bcer98_3746  glycosyl transferase family protein  34.7 
 
 
357 aa  160  3e-38  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00672292  n/a   
 
 
-
 
NC_013411  GYMC61_3260  Glycosyl transferase, family 4, conserved region  34.24 
 
 
360 aa  156  7e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_5311  glycosyl transferase, group 4 family protein  33.12 
 
 
353 aa  155  1e-36  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4895  glycosyl transferase, group 4 family protein  33.12 
 
 
357 aa  155  1e-36  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2376  glycosyl transferase family 4  31.85 
 
 
312 aa  155  1e-36  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0310608  normal 
 
 
-
 
NC_011658  BCAH187_A5367  glycosyl transferase, group 4 family protein  33.12 
 
 
357 aa  155  1e-36  Bacillus cereus AH187  Bacteria  normal  0.333847  n/a   
 
 
-
 
NC_005945  BAS5050  glycosyl transferase, group 4 family protein  33.12 
 
 
357 aa  153  4e-36  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5435  group 4 family glycosyl transferase  33.12 
 
 
357 aa  153  4e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5291  glycosyl transferase, group 4 family protein  33.12 
 
 
357 aa  153  4e-36  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000405483 
 
 
-
 
NC_005957  BT9727_4880  glycosyl transferase family protein  33.12 
 
 
357 aa  153  5e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0124  glycosyl transferase family protein  33.23 
 
 
371 aa  152  8.999999999999999e-36  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000790838  n/a   
 
 
-
 
NC_004116  SAG0140  glycosyl transferase, group 4 family protein  30.7 
 
 
386 aa  151  2e-35  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4995  glycosyl transferase family protein  32.81 
 
 
357 aa  151  2e-35  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0414  glycosyl transferase, group 4 family protein  31.25 
 
 
359 aa  147  2.0000000000000003e-34  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0217  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase  30.97 
 
 
385 aa  148  2.0000000000000003e-34  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4628  Glycosyl transferase, family 4, conserved region  34.53 
 
 
407 aa  147  3e-34  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.520288 
 
 
-
 
NC_011725  BCB4264_A5322  glycosyl transferase, group 4 family protein  32.18 
 
 
357 aa  146  5e-34  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5637  glycosyl transferase, group 4 family protein  32.18 
 
 
357 aa  146  5e-34  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000033302 
 
 
-
 
NC_013165  Shel_14670  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase  31.34 
 
 
391 aa  146  5e-34  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.0872844  decreased coverage  0.000000374023 
 
 
-
 
NC_008527  LACR_1975  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase  30.29 
 
 
441 aa  145  1e-33  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3327  glycosyl transferase family protein  31.76 
 
 
521 aa  142  9e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.198466 
 
 
-
 
NC_011899  Hore_17910  glycosyl transferase family 4  29.29 
 
 
351 aa  141  1.9999999999999998e-32  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4113  glycosyl transferase family 4  31.25 
 
 
366 aa  141  1.9999999999999998e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00000368413  hitchhiker  0.000004636 
 
 
-
 
NC_013385  Adeg_1971  Glycosyl transferase, family 4, conserved region  33.33 
 
 
354 aa  141  1.9999999999999998e-32  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2580  glycosyl transferase family 4  34.87 
 
 
554 aa  140  3e-32  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3322  glycosyl transferase family protein  29.11 
 
 
355 aa  139  7e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.120445  n/a   
 
 
-
 
NC_008530  LGAS_1336  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase  30.5 
 
 
380 aa  139  1e-31  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000000828029  normal 
 
 
-
 
NC_007760  Adeh_4277  glycosyl transferase family protein  31.78 
 
 
495 aa  137  2e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3395  glycosyl transferase family 4  31.89 
 
 
340 aa  136  6.0000000000000005e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.324649  normal 
 
 
-
 
NC_009012  Cthe_2600  glycosyl transferase family protein  31.44 
 
 
376 aa  135  9.999999999999999e-31  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4878  glycosyl transferase family protein  32.44 
 
 
369 aa  135  9.999999999999999e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.777733  n/a   
 
 
-
 
NC_011898  Ccel_0262  UDP-N-acetylglucosamine 2-epimerase  32.45 
 
 
762 aa  134  1.9999999999999998e-30  Clostridium cellulolyticum H10  Bacteria  normal  0.0133132  n/a   
 
 
-
 
NC_008816  A9601_13961  hypothetical protein  28.33 
 
 
352 aa  135  1.9999999999999998e-30  Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2406  glycosyl transferase family 4  32.89 
 
 
348 aa  134  3e-30  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000000000955005  n/a   
 
 
-
 
NC_007604  Synpcc7942_0281  glycosyltransferase  33 
 
 
357 aa  133  5e-30  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0218  glycosyl transferase family protein  34.29 
 
 
349 aa  133  5e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2092  glycosyl transferase family protein  29.97 
 
 
353 aa  131  2.0000000000000002e-29  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3206  family 4 glycosyl transferase  34.19 
 
 
360 aa  131  2.0000000000000002e-29  'Nostoc azollae' 0708  Bacteria  normal  0.514524  n/a   
 
 
-
 
NC_010803  Clim_1905  glycosyl transferase family 4  31.77 
 
 
399 aa  129  8.000000000000001e-29  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2584  glycosyl transferase family protein  30.54 
 
 
542 aa  129  8.000000000000001e-29  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1111  glycosyl transferase family 4  31.88 
 
 
340 aa  129  9.000000000000001e-29  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0814106  n/a   
 
 
-
 
NC_009523  RoseRS_4524  glycosyl transferase family protein  30.56 
 
 
336 aa  128  1.0000000000000001e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.183684  normal 
 
 
-
 
NC_009253  Dred_3102  glycosyl transferase family protein  31.1 
 
 
361 aa  129  1.0000000000000001e-28  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000798419  n/a   
 
 
-
 
NC_007577  PMT9312_1319  putative UDP-N-acetylglucosamine-1-phosphate transferase  27.57 
 
 
329 aa  129  1.0000000000000001e-28  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.0207184  n/a   
 
 
-
 
NC_009675  Anae109_4433  glycosyl transferase family protein  33.23 
 
 
496 aa  129  1.0000000000000001e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1677  glycosyl transferase family 4  32.91 
 
 
349 aa  127  4.0000000000000003e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.910123  normal 
 
 
-
 
NC_012034  Athe_0835  glycosyl transferase family 4  27.95 
 
 
326 aa  126  6e-28  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0917  Glycosyl transferase, family 4, conserved region  32.13 
 
 
321 aa  126  8.000000000000001e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2077  glycosyl transferase family protein  30.33 
 
 
348 aa  125  1e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  0.212955  hitchhiker  0.00061556 
 
 
-
 
NC_009767  Rcas_0017  glycosyl transferase family protein  29.9 
 
 
333 aa  124  2e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.000233702 
 
 
-
 
NC_014212  Mesil_2516  Glycosyl transferase, family 4, conserved region  31.29 
 
 
370 aa  123  4e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3765  glycosyl transferase family protein  32.79 
 
 
360 aa  123  6e-27  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.00610476  normal  0.0995629 
 
 
-
 
NC_007517  Gmet_1505  glycosyl transferase family protein  31.75 
 
 
545 aa  121  1.9999999999999998e-26  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4899  family 4 glycosyl transferase  31.17 
 
 
349 aa  120  3e-26  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2170  glycosyl transferase family 4  31.23 
 
 
375 aa  120  4.9999999999999996e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.228946 
 
 
-
 
NC_011059  Paes_1769  glycosyl transferase family 4  32.51 
 
 
394 aa  119  9.999999999999999e-26  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0297431  normal  0.100208 
 
 
-
 
NC_014148  Plim_2437  glycosyl transferase family 4  27.84 
 
 
437 aa  118  1.9999999999999998e-25  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.957951  n/a   
 
 
-
 
NC_011729  PCC7424_3472  glycosyl transferase family 4  31.23 
 
 
360 aa  118  1.9999999999999998e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.333059 
 
 
-
 
NC_010831  Cphamn1_1974  glycosyl transferase family 4  29.38 
 
 
393 aa  117  3.9999999999999997e-25  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.2077 
 
 
-
 
NC_008312  Tery_2661  glycosyl transferase family protein  28.4 
 
 
372 aa  115  7.999999999999999e-25  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.705684 
 
 
-
 
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