Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6145 |
Symbol | |
ID | 8330355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7195245 |
End bp | 7196414 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644946578 |
Product | glycosyl transferase family 4 |
Protein accession | YP_003103798 |
Protein GI | 256380138 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.439375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGCCAGT TGCCTGCCGC GTCCAACGTC CTCCCGGTCC GGGAGTACCT GCTCGTCGCG CTCACCGCCG CAGTGGTGAC TTTCCTCCTC GTCGGCCTGG TCCGCGCGCT CGCGTTCCGG ATCGGCGCGG TCGCCCACCC CCGAACACGC GACGTCCACG TCAAGCCGAT GCCCCGCATG GGCGGCCTGG CCATGTACGG CGGCGTGCTC GGCGGGATGA TGCTCGCCCA CCAGCTGCCG GTGCTGCGCT CAGCCTTCGA CTTCTCCTAC GACCCCTACG CCGTCGTCCT CGGCGGCGGC ATCATCGTGC TGGTCGGCAT AGTCGACGAC CGGTTCGAGC TCGACTCGCT CACCAAGCTC GCCGGCCAGG TCACGGCCGC AGGCGTGCTC GTCCTCTACG GCCTCCAGTG GTTCGTGTTC TGGGTGCCGT GGGGCGACGA CGGCTCCGGC ACCGGCTCGC TGCTGGTGCT CGACCAGAAC CAGGGCGCGC TGCTGAGCGT GCTGCTCGCC GTCACGATGA TCAACGCGAT GAACTTCGTG GACGGCCTCG ACGGCCTCGC CGCGGGCATC GGGCTGATCG CCGCCGCGGC GACCTGCGCG TTCTCCATCG GTGGTGTCCT CGCCAACAAC GAGGGCGACG TCGGCGCCTA CCCGCCCGCG CTGATCGCGG CGTGCCTGGC GGGCGCGTGC CTGGGCTTCC TGCCGCACAA CTTCAACCCG GCCCGGATCT TCATGGGCGA CTCGGGGTCG ATGCTGATCG GCCTGATGCT CGCCGCCGCG ACCACCTCGG CGTCCGGCAA GCTCAACTAC GAGTCGCTCA ACGCCAGCGA CGTGCTCGGC CTGATGTCGC CCCTGCTGGT CGTCGCCGCG GTGCTGTTCG TGCCGCTGCT GGACCTGCTG ATGGCGATCG TCCGGCGCAC CCGCAAGGGG CAGAGCCCGT TCTCGGCGGA CAAGATGCAC CTGCACCACC GGCTGCTCCA GATCGGCCAC TCGCAGCGCC GCGCCGTCCT GCTGATCTAC CTGTGGGCCG GGCTGCTGGC GTTCGGCGCG GTCTCGCTGA CCGTGTTCGA CACCGGCGTG GTCGCCTGGT GCTTCCTGAT CGGACTGCTG CTCGCGTTCT TCATCTCGGC GGTCCCGAGA CTCCGCGAGT CGCGCAAGAA CCGAGCGTGA
|
Protein sequence | MGQLPAASNV LPVREYLLVA LTAAVVTFLL VGLVRALAFR IGAVAHPRTR DVHVKPMPRM GGLAMYGGVL GGMMLAHQLP VLRSAFDFSY DPYAVVLGGG IIVLVGIVDD RFELDSLTKL AGQVTAAGVL VLYGLQWFVF WVPWGDDGSG TGSLLVLDQN QGALLSVLLA VTMINAMNFV DGLDGLAAGI GLIAAAATCA FSIGGVLANN EGDVGAYPPA LIAACLAGAC LGFLPHNFNP ARIFMGDSGS MLIGLMLAAA TTSASGKLNY ESLNASDVLG LMSPLLVVAA VLFVPLLDLL MAIVRRTRKG QSPFSADKMH LHHRLLQIGH SQRRAVLLIY LWAGLLAFGA VSLTVFDTGV VAWCFLIGLL LAFFISAVPR LRESRKNRA
|
| |