| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0525 |
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| Symbol | |
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| ID | 8413377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 606675 |
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| End bp | 607895 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022096 |
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| Product | Phospho-N-acetylmuramoyl-pentapeptide- transferase |
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| Protein accession | YP_003179547 |
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| Protein GI | 257784330 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000346321 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000470096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | TTGAACCTCT GGGTAACCAT GTTTTGTGTT TTCCTCTCAG CTGGTCTTGG TTCAGCGCTG
ATTACCCCTG CCGTTCGTCA GCTGGCCTGG AAACTTGGAG TTGTCGATAA ACCCTCTGCA
CGTCGAGTTA ATAAAAAACC TGTCCCTCGC ATGGGTGGCG TAGCCATTTT CTTTGGACTA
GCCGTTGCTA TGCTGGTACG TTATGGCGTT GAAGCAATTC TTGGACATGC CGAGATTACC
TTCTCTTCCC ACTACTATCT CAACGTCAAC TTCTGGATTG TTGGTGCTGC GTTTGTTGTC
ATTTTCTTAA CCGGCTTACT TGACGACATT TTTTCTCTCA AGCCTATCCA AAAACTTGCT
GGTCAGTTTA TTGCCGCAAG CATTGCAGCA GCAGACGGTC TGATTATCGG TAATGTCGTT
GATCCATTTA CCGCGTATGG CTTTGTAGAT CTTGGCTGGC TTGCCTATCC AGCAACTGTC
ATCTACTTGG TTGCTTACGC TAATATCATT AATCTTATCG ATGGTCTTGA TGGACTTTCT
TCAGGAATTA CTTGCATTGC CTCTACCACA ATGTTTGTAC TTTCTATTTG GGCAGGACGA
TTTGATGCTG CACTTTTAAG TGCAGCGATC GCAGGCACTA CGCTAGGATT TTTGGTTCAT
AACTCGTACC CTGCAACTAT CTTCATGGGC GATTCTGGTT CCCTGACCTT AGGATTTGCT
TTAGGAACAA TTTCGCTTTT GTCCGTCACC CGCTGGGCAG GACTCACAAC CATCATTGTT
CCTCTCGTCG TTGCAGGTAT TCCAATCATT GATACCTTCT CGGCAATCGT CCGCCGTACA
CGCGCACACG TCAGTTTTGC CACCGCCGAC CGCGGACACA TCCATCATCG CCTGATGGCG
CACGGATACA ACCAGCGCCA AGCAGTTCTT TTGATGTATG GCTGGACTTC CCTCTTGTGC
GTTGGCTCGC TCATTATGAC GCAGGTCAAC ACGATACCTC GTATTGCAAT TTTTGTTCTA
CTGCTTACCA TGTCTGCGCT CTTTGCAAAA TATCTACATT TATTTGAGCC CGTTTTGCTG
CACCACACTG ACCCAAAGAC TGGCGAAGAC GAGCTCATTG ATCCAAAAGA CCCGGACTTC
GATAAAGAAA TTAAACAGTT CCACGAAGAA GAGCACGAGC ATTTCGAAGA GCTCATCCAT
GGAGATTACA AGAACGAATA A
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| Protein sequence | MNLWVTMFCV FLSAGLGSAL ITPAVRQLAW KLGVVDKPSA RRVNKKPVPR MGGVAIFFGL
AVAMLVRYGV EAILGHAEIT FSSHYYLNVN FWIVGAAFVV IFLTGLLDDI FSLKPIQKLA
GQFIAASIAA ADGLIIGNVV DPFTAYGFVD LGWLAYPATV IYLVAYANII NLIDGLDGLS
SGITCIASTT MFVLSIWAGR FDAALLSAAI AGTTLGFLVH NSYPATIFMG DSGSLTLGFA
LGTISLLSVT RWAGLTTIIV PLVVAGIPII DTFSAIVRRT RAHVSFATAD RGHIHHRLMA
HGYNQRQAVL LMYGWTSLLC VGSLIMTQVN TIPRIAIFVL LLTMSALFAK YLHLFEPVLL
HHTDPKTGED ELIDPKDPDF DKEIKQFHEE EHEHFEELIH GDYKNE
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