Gene Cagg_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2170 
Symbol 
ID7266743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2662398 
End bp2663525 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content56% 
IMG OID643567001 
Productglycosyl transferase family 4 
Protein accessionYP_002463489 
Protein GI219849056 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.228946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTA TGCTGGCTTT GATAGGTGTA CCGCTGATCG CCTTCGTCGT TACGGCCTTG 
CTCACCCCAC CGCTGATCAC TTTGGCCCGA CGAGAAGGAT GGGTGGCAAA ACCCGGCCCC
CGCCACGTGC ATCGCGAACC TACACCGGTT GTTGGCGGTT TGGCGATGAT AGCGGGGTTG
GTCGTCGCAT TGATCGCCAG TCTTGGGTTT GAGCTGCTGA CGCCGGTCCT GCACCGTTCG
CCGTTTGAAC ATTTACGGAT CGGTTTGCTT CTGATCGGTA TTGCCATCAT TGCCGGTGTC
AGTTTACTCG ATGATCTCTA CGACTTGCCG GCGTTGCCTC GGTTAGGGGT CCATATCATT
GCAGCGCTCG TCGCCGTTGG ACCGTATTTG TGGGATCATA CGCTCTACCC TGATGCACTT
GGCCAACCAA CAGAAGCGCG CGGGATTATT CTCACTGCCT TCAATTTTCC CTTCGTGTAT
CAAATCCATC TCCATAACCT TAGTCCGTGG TTGGCGATTG CCGCAACCGT GTTCTGGATT
GTGGGGATGC AGAATATGGT CAACTGGCTC GATGGGCTTG ATGGGTTGGC TGCCGGTGTG
ACGTTGATTG CCGGTGTGGT GTTGGCTCTG CATACCCTCA CCCTCGAACC ACCACAAATG
ACGGTGGCAT TGCTCCCGCT GGCGCTGAGT GGTGTCTGCG CAGCGTTCCT CCTCTATAAC
TCGCACCCTG CTCGCATTTT TATGGGTGAT GTTGGGGCGA TGACGATTGG TTATACGTTA
GGCATTTGTG CCCTCATCGG TGGGGCTAAA TTGGCGACCG TCCTCCTCGT GCTTGGGGTG
CCGCTGGTCG ATATGGCCTG GCTAATCTTA ACCCGGACCT TACGGGGGCG CTCGGCAGCG
CAAGCCGGAC GCGATCATCT CCATCACCGG TTCCTCGATC TCGGTCTGAG TCAGCGGCAG
GTAGTGGCCT GCTATTACGG GTTGAGCATC GCTTTTGGCG CCATTGGTTT GCTCGACTTC
TTTACCCCTC TCATGAAGCT CATTGCGTTG GTACTGTTGG GGCTGGTTGT CCTCGTGATA
TTGATCGTAT TACAACCAAA GCCGACAACT CACGCAGCAC GACTGTAA
 
Protein sequence
MPVMLALIGV PLIAFVVTAL LTPPLITLAR REGWVAKPGP RHVHREPTPV VGGLAMIAGL 
VVALIASLGF ELLTPVLHRS PFEHLRIGLL LIGIAIIAGV SLLDDLYDLP ALPRLGVHII
AALVAVGPYL WDHTLYPDAL GQPTEARGII LTAFNFPFVY QIHLHNLSPW LAIAATVFWI
VGMQNMVNWL DGLDGLAAGV TLIAGVVLAL HTLTLEPPQM TVALLPLALS GVCAAFLLYN
SHPARIFMGD VGAMTIGYTL GICALIGGAK LATVLLVLGV PLVDMAWLIL TRTLRGRSAA
QAGRDHLHHR FLDLGLSQRQ VVACYYGLSI AFGAIGLLDF FTPLMKLIAL VLLGLVVLVI
LIVLQPKPTT HAARL