Gene Bcav_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_1290 
Symbol 
ID7858753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp1465896 
End bp1467014 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content71% 
IMG OID643865375 
Productglycosyl transferase family 4 
Protein accessionYP_002881312 
Protein GI229819786 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.388977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGTCT ACCTCCTGGT CCTGCTGATC TCCGCGGGGG TCACCGTCCT CGCGACCCCG 
CTCGCCCGCT GGATCGCCCG CCGCACGAAC GCTGTGACGC CGTTGCGCGA GCGCGACGTC
CACACTGTGC CGACCCCCCG CCTCGGGGGG CTCGCGATGC TCGTGGGGCT CGCCGTCGCG
CTCCTGCTCG CCTCGCAGAT GCCGTTCCTG GAACCGGTGT TCGCGACGTC GAACCAGGCG
TGGGCGATCC TCGGGGGCGC GACGATCGTG TGCCTGCTCG GGGTCGCTGA CGACATCTGG
GACCTCGACT GGATCACGAA GCTCGTCGGG CAGATCCTGG CGGCCGGGTT CATCGCCTGG
CAGGGCGTCC AGCTCGTGAC GCTCCCGATC GCCGGGACGA CGATCGGCTC GTCACGACTC
TCGTTGATCC TGACGGTGCT CGTCATCGTC GTCGCGATGA ACGCCGTGAA CTGGGTGGAC
GGCCTCGACG GGCTCGCGGC CGGCGTCATC GCGATCGGCG GCGCCGCCTT CTTCGTCTAC
ACGTACCTCC TGACCACCGA GGCGAGCCCG GGGGACTACT CGGACCTCGC GACGATGGTG
CTCGCGGCTC TGGTGGGCGC GTGCCTCGGC TTCCTCCCGC ACAACTTCTT CCCGGCCCGC
ATCTTCATGG GCGACTCCGG CGCGATGATG CTCGGACTCG TGGTGGCCTC GACGGCCATC
GTCGTCACCG GTGACATCGA CGCCGGCACC GTGTCGCAGC GTGAGCAGTT CCCGGCGTTC
CTGCCGATCG TCCTGCCGTT CGCCGTGCTC CTGGTGCCGC TCGTCGACGT GCTCGTCGTC
GTCGTCCGCC GGGTCGCGGC CGGCAAGGCG CCCTGGGCGG CCGACAACAG CCACCTGCAC
CATCGCCTCA TGGCGCGCGG GCACAGCCAC CGGCGGACCG TCGTGATCCT CTACATGTGG
ACGTTCCTCG TGGCGTTCGG CGCGGCCTCG CTCGCCGTGC TGCCGACGAC GACGGTGCTC
GTGCTGCTCG GGGTCGGTGT GGCGATCGCC ACGTTCCTCT CCGTCGTCCC GCTCCCGGTG
CGCCGCCGAC GGCGCAGACC GCCCGTCCCG GTGCCCTAG
 
Protein sequence
MRVYLLVLLI SAGVTVLATP LARWIARRTN AVTPLRERDV HTVPTPRLGG LAMLVGLAVA 
LLLASQMPFL EPVFATSNQA WAILGGATIV CLLGVADDIW DLDWITKLVG QILAAGFIAW
QGVQLVTLPI AGTTIGSSRL SLILTVLVIV VAMNAVNWVD GLDGLAAGVI AIGGAAFFVY
TYLLTTEASP GDYSDLATMV LAALVGACLG FLPHNFFPAR IFMGDSGAMM LGLVVASTAI
VVTGDIDAGT VSQREQFPAF LPIVLPFAVL LVPLVDVLVV VVRRVAAGKA PWAADNSHLH
HRLMARGHSH RRTVVILYMW TFLVAFGAAS LAVLPTTTVL VLLGVGVAIA TFLSVVPLPV
RRRRRRPPVP VP