16 homologs were found in PanDaTox collection
for query gene HMPREF0424_0444 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013721  HMPREF0424_0444  hypothetical protein  100 
 
 
598 aa  1236    Gardnerella vaginalis 409-05  Bacteria  n/a    hitchhiker  0.000204503 
 
 
-
 
NC_010816  BLD_0109  putative aminoglycoside phosphotransferase  44.43 
 
 
551 aa  455  1e-127  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2477  aminoglycoside phosphotransferase  26.43 
 
 
426 aa  96.3  1e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000140832 
 
 
-
 
NC_008541  Arth_2755  aminoglycoside phosphotransferase  25.5 
 
 
401 aa  96.3  2e-18  Arthrobacter sp. FB24  Bacteria  normal  0.133804  n/a   
 
 
-
 
NC_012669  Bcav_2900  aminoglycoside phosphotransferase  28.74 
 
 
386 aa  78.6  0.0000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.123406  normal  0.0517924 
 
 
-
 
NC_013172  Bfae_11380  predicted aminoglycoside phosphotransferase  26.74 
 
 
321 aa  73.6  0.00000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_15080  predicted aminoglycoside phosphotransferase  28.78 
 
 
345 aa  72.4  0.00000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0783  aminoglycoside phosphotransferase  26.85 
 
 
306 aa  72.8  0.00000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.277231  n/a   
 
 
-
 
NC_009664  Krad_1175  aminoglycoside phosphotransferase  26.21 
 
 
315 aa  67.8  0.0000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.179937 
 
 
-
 
NC_013521  Sked_27590  predicted aminoglycoside phosphotransferase  25.4 
 
 
505 aa  66.2  0.000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0713  aminoglycoside phosphotransferase  27.56 
 
 
455 aa  62  0.00000003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2821  aminoglycoside phosphotransferase  28.19 
 
 
302 aa  60.8  0.00000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2472  aminoglycoside phosphotransferase  29.63 
 
 
312 aa  57.4  0.0000008  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0185974  hitchhiker  0.00725636 
 
 
-
 
NC_013169  Ksed_19180  predicted aminoglycoside phosphotransferase  27.87 
 
 
306 aa  50.1  0.0001  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.209047  normal  0.05803 
 
 
-
 
NC_014210  Ndas_1658  aminoglycoside phosphotransferase  23.84 
 
 
299 aa  48.5  0.0003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.336937  normal 
 
 
-
 
NC_007953  Bxe_C0284  putative aminoglycoside phosphotransferase  32.14 
 
 
351 aa  47.8  0.0006  Burkholderia xenovorans LB400  Bacteria  normal  0.846831  normal 
 
 
-
 
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