| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0444 |
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| Symbol | |
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| ID | 8709790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 485930 |
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| End bp | 487726 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646482559 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373689 |
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| Protein GI | 283782935 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000204503 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTATTACT GTGGGAGTGT GACACAACTC AGTAGATTCA AGTTGGCAGC ACTGGCATCT
GCAGCCATGC CCGAAGTACA GTTTGCAGGA ACACGCCAAA GTGAGCAAGT TAATGCCACT
GATACCGCGG CTGGAATTTC TCACGCCGTT GTGCAAGATA TTTCCGGTAA GCTTTACGAC
GTTTTTATCA GTGCGGATAG TAAAGGTCGC AAGCGTTTGC ATGACCGGGC TCGTGCAGCA
TGGACTCTTG AGCACAGTAA AGATTTGGCA GCTTTGGGAT TCGCTTACGA CACTATGCTC
ACGTTTATGC CAGGAAAACG CGAAGATGCT AATAATAACG CTGGAAATGT TGCAAATAAT
GTAACCGATG AAAATTCTAC AGTTGCTGGC ACTCAGCAAT ACGTACAACA GCAATCTACA
CAACAGCAAT CTATACGAAT GTCAAGCATT ATTGCCAACA ACAACGATGA AGACACTGTG
CTTATTTGCG AACATCTTGA AGGTAGCGCT CGCGACTTGC GTCTTCTTAC TACTGACGAT
TGCGCAAATG TTGGAACTGC AATCGGCGCT ATTCATCGCC TGCGCCCTAC TTTCGTAACG
CGCGGAAAAT ACTCTGCTTT TACTACTGGT CAAATTCGCG CACAGTTAAC CGGTTGGATT
AAAAGACTTC GTCAAGCCGG TCATATTCCA ACCGAAATTA CTGACAGTTG GTCAAGAGTG
TTGGAAACTG AAGGATTGTG GTCATTTGAA ACTTGCCCAG TACACGGCGG TTTTATGGAT
GGCGACATTT TGTTTGCTGG CTCAACAATT ACTGCTGTGA CAAATTGGCA AAGAATGCAA
ATTAACGATC CTGCGCGCGA TTTGGCTTGG ATTTTTGCAA AACTTAACGA GCAGCGCCGA
AACGCAGTGC TTTCTGCATA CGGTAGAATT ATGGGTTCTC GTTTAGATAG TTTGATTATG
CTTCGCGCAA ACTTGTGGCT GCAAATGGAA CAAGTTGGCG ATTTTGTTCA AGCTTTGCAA
CGTGCAGATA ACACTAGTAT TATGCGTTTT AAGGCTCAAG TTGAGCGTTT AGCGCACGAG
CTTAGTCGTA TTAGCAATGC ACAAACTGCT AAAACTGGTC GTGCTGCAGG AAATCCCGTC
TCGACTATTA CAGTTGGAAC GCTTCTTGAA AATGACAATA CGCAAAGTCG CCAAATTTCT
AAGAATAATT CTACTGAAAA CCAACTAAAC ACTGGAAATA GCGACGAAAC TCATGAGCGA
GACATTACTT CAGAAAGAAA TACTGAATTA AATAACACTC AAGACGAGAC TTACGATAGC
AACAAAACTA TAAGCGACGA TACTCATGAG CGCAAAGTTC AATATGCTGG CACACACGCA
GCTAACGCTG AGGAGGCTGA AAAAGCAGCA CAACTCGCTG ACGACACAGC AACTCAAGTA
ATTACTCATG TAAAAACTCA AACAGTACAC GAAACCGCAG AAACTATTGT GCAAACTGCA
ATGAGTAAAT CTGCCGATAG CAATGCTAGT GCTGAGCATG AAAACGTTAG TAACGCTGGT
AGCAATGAGG AAGCTAAGGA CGCCAAGAAC AACAATGATT CTGAGGTTAA GGATGAAGTT
ATAGTTGAGC GTGACAGTAA GGTTGATAGC GCAAACGAGA CTTCTTCGGA CTCAAAACTT
TCTGAAGATA CAGAAAGAAA TACGCAAAAA AATGACGATA AACCAGAAAC CGTAATCATC
CCTCTGCTAG AGCGTGAAGA ACGAGCAATG CGCGACGCAC AAGCAGACTT AGACTAA
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| Protein sequence | MYYCGSVTQL SRFKLAALAS AAMPEVQFAG TRQSEQVNAT DTAAGISHAV VQDISGKLYD
VFISADSKGR KRLHDRARAA WTLEHSKDLA ALGFAYDTML TFMPGKREDA NNNAGNVANN
VTDENSTVAG TQQYVQQQST QQQSIRMSSI IANNNDEDTV LICEHLEGSA RDLRLLTTDD
CANVGTAIGA IHRLRPTFVT RGKYSAFTTG QIRAQLTGWI KRLRQAGHIP TEITDSWSRV
LETEGLWSFE TCPVHGGFMD GDILFAGSTI TAVTNWQRMQ INDPARDLAW IFAKLNEQRR
NAVLSAYGRI MGSRLDSLIM LRANLWLQME QVGDFVQALQ RADNTSIMRF KAQVERLAHE
LSRISNAQTA KTGRAAGNPV STITVGTLLE NDNTQSRQIS KNNSTENQLN TGNSDETHER
DITSERNTEL NNTQDETYDS NKTISDDTHE RKVQYAGTHA ANAEEAEKAA QLADDTATQV
ITHVKTQTVH ETAETIVQTA MSKSADSNAS AEHENVSNAG SNEEAKDAKN NNDSEVKDEV
IVERDSKVDS ANETSSDSKL SEDTERNTQK NDDKPETVII PLLEREERAM RDAQADLD
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