Gene Sked_27590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_27590 
Symbol 
ID8634393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3071997 
End bp3073514 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content76% 
IMG OID 
Productpredicted aminoglycoside phosphotransferase 
Protein accessionYP_003315495 
Protein GI269796040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCC TGGCTGCGGG GTGCCTCCGG GCCGTCCGGC GACCTTCCGT CTACCGTGGG 
AGCGTGCCTC GTTCTCCGCT CGCCCTCGCC GCCCTCTCCA CCCTGGCCGT GCCCGGGCTC
GACGTGCACG GCGTGCAGCC GAGCCCGGCC CCTGCCGGCT TCGACGCCGC GACCGCCGTC
GACTCCGAGC GCCGACGCTG GGTGGTGCGT GCTCCCGCGA CCCTCGCCGC CGGGGCAGCT
CTCGAGGCCG AGGTCGCCTT CCTCGCCGCG CTCGAGTCGT ACGTGGACGA CGGCCGGCTC
CCCTTCGAGG TGCCGCGCGC GGCCGGCTTC GCACCGCTCC CCGAGGGCGG ACGTGCCGTG
GTGTACCCCG ACCTGCCCGG TCACCCGCTG CGGGTCGAGC GCATCGTGCC GGGTCCCGGG
CTGAGCGCGA GCCTCGGGCG GGCCGTCGGG GCGCTGCACG AGCTGCCCGT GTCGATCGTC
GAGCGCGCCG GTCTCCCGGT GTACTCCGCC CAGGAGTACC GCGAGCGGCG CCTCTCCGAG
GTGGACGCCG CCGCCTCGAC GGGCCGCGTG CCGGTCGGGC TGCTGCGCCG CTGGGAGCGG
TCGCTCGAGG AGGTCTCGAT GTGGCGCTTC AGCCCCACGA TCACGCACAC CGCCCTGTCG
GCGGACACCT TCCTGGTGCG GGCCGGTCAG GTGAGCGCGA TCAGCGACTT CGCCGACGTC
CAGGTGGGCG ACCCTGCGGA CGACCTCGCG TGGCTGCTGG TCACCGCCCC GCAGGACGCG
ATCGAGTCGA TCCTCGAGGC CTACCAGCTG CGCCGCACCG AGCTGACCGA CAAGCACCTC
GTGGACAGGG CCCTGCTCGC CTCCGAGCTC GCCCTCGCCC GGTGGCTGCT GCACGGGGTT
CGGACCAAGG ACGACGAGGT GGTCGAGGAC GCCGTCAGCA TGCTCGCCGA CCTCGAGCGC
GCAGCGACCG AGGTGGGCGC CTTCTCGGTC GCGACCGGTC AGGTCCCCAC GGCCGGCGGC
CGCGCTGCGG CGGTCTCTGC GCCGACGCCG CGGGCGACCT CCGTGCACGC GCAGGCCCAG
GACGAGGCGA TCGAGCGAGC CCGCGGCGAG CGGTCGACCG GGTCGACCCC GGTCGCACCG
CCGGGATCGG CGAAGAGCAC GACACCCTCG GCGCACGACC ACGCTGCTCC CGGTGCGGAG
CGCGACGGCG CCACCGGGAC GGAGACCGAC GAGGACGAGG CGGTCCGGGT CCCCGACTAC
GACCGGGTCC AGCCGCGCCC GCTGCAGGAC GTGGCGACGG CGGCGTTCAC CGCCCCTGTC
CGGGTGGTCG GCACCGAGGC GGTCGCCGCC CCCGCAGGCA GGGACCAGGG CCCGTCCGAC
GACGCAGCGG CCGGAGCCGT CCCGCCCCCA CCGCCGCCGA CCGGCCCGGT CCCCACGACC
TCGTCCGACG AGACCGAGCA GGACACCCAG GCAGCGTCAG CCGAGAAGAA GAGCAGCAGC
GCAGACGACG AGGGCTGA
 
Protein sequence
MLTLAAGCLR AVRRPSVYRG SVPRSPLALA ALSTLAVPGL DVHGVQPSPA PAGFDAATAV 
DSERRRWVVR APATLAAGAA LEAEVAFLAA LESYVDDGRL PFEVPRAAGF APLPEGGRAV
VYPDLPGHPL RVERIVPGPG LSASLGRAVG ALHELPVSIV ERAGLPVYSA QEYRERRLSE
VDAAASTGRV PVGLLRRWER SLEEVSMWRF SPTITHTALS ADTFLVRAGQ VSAISDFADV
QVGDPADDLA WLLVTAPQDA IESILEAYQL RRTELTDKHL VDRALLASEL ALARWLLHGV
RTKDDEVVED AVSMLADLER AATEVGAFSV ATGQVPTAGG RAAAVSAPTP RATSVHAQAQ
DEAIERARGE RSTGSTPVAP PGSAKSTTPS AHDHAAPGAE RDGATGTETD EDEAVRVPDY
DRVQPRPLQD VATAAFTAPV RVVGTEAVAA PAGRDQGPSD DAAAGAVPPP PPPTGPVPTT
SSDETEQDTQ AASAEKKSSS ADDEG