18 homologs were found in PanDaTox collection
for query gene GYMC61_3246 on replicon NC_013411
Organism: Geobacillus sp. Y412MC61



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013411  GYMC61_3246  SH3 type 3 domain protein  100 
 
 
225 aa  454  1e-127  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_3244  N-acetylmuramoyl-L-alanine amidase  33.33 
 
 
815 aa  74.7  0.000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013385  Adeg_0477  N-acetylmuramoyl-L-alanine amidase  31.47 
 
 
377 aa  60.5  0.00000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2151  NLP/P60 protein  30.6 
 
 
424 aa  58.9  0.00000006  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.00000000325506  n/a   
 
 
-
 
NC_007644  Moth_0517  N-acetylmuramoyl-L-alanine amidase  40.32 
 
 
657 aa  52  0.000008  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000337238  normal 
 
 
-
 
NC_011831  Cagg_2861  SH3 type 3 domain protein  37.66 
 
 
147 aa  50.8  0.00002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000301098  normal 
 
 
-
 
NC_013926  Aboo_1416  glycoside hydrolase family 25  40.32 
 
 
574 aa  47.8  0.0001  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_008346  Swol_0126  N-acetylmuramoyl-L-alanine amidase  27.5 
 
 
907 aa  46.6  0.0003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.861357  n/a   
 
 
-
 
NC_011831  Cagg_2017  NLP/P60 protein  26.39 
 
 
536 aa  46.6  0.0003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.474847  normal 
 
 
-
 
NC_010424  Daud_1509  N-acetylmuramoyl-L-alanine amidase  24.18 
 
 
751 aa  44.7  0.001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0136849  n/a   
 
 
-
 
NC_005957  BT9727_1787  NLP/P60 family protein  24.62 
 
 
420 aa  42  0.007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.000000000289825  n/a   
 
 
-
 
NC_011773  BCAH820_1988  putative cell wall peptidase, NlpC/P60 family  24.62 
 
 
420 aa  42  0.007  Bacillus cereus AH820  Bacteria  n/a    decreased coverage  3.1332199999999997e-59 
 
 
-
 
NC_010320  Teth514_0272  5'-nucleotidase domain-containing protein  28.57 
 
 
1284 aa  42  0.007  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1952  NLP/P60 family protein  24.62 
 
 
420 aa  42.4  0.007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.000344583  n/a   
 
 
-
 
NC_005945  BAS1812  NLP/P60 family protein  24.62 
 
 
420 aa  42.4  0.007  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.000000382267  n/a   
 
 
-
 
NC_011772  BCG9842_B3369  putative cell wall peptidase, NlpC/P60 family  24.62 
 
 
432 aa  42  0.008  Bacillus cereus G9842  Bacteria  hitchhiker  0.00000232864  unclonable  2.00404e-25 
 
 
-
 
NC_011725  BCB4264_A1959  putative cell wall peptidase, NlpC/P60 family  24.62 
 
 
413 aa  42  0.008  Bacillus cereus B4264  Bacteria  hitchhiker  0.000655429  n/a   
 
 
-
 
NC_009972  Haur_4384  NLP/P60 protein  22.77 
 
 
556 aa  41.6  0.009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000240419  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>