Gene Cagg_2861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2861 
Symbol 
ID7267567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3514342 
End bp3514785 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID643567682 
ProductSH3 type 3 domain protein 
Protein accessionYP_002464159 
Protein GI219849726 
COG category[T] Signal transduction mechanisms 
COG ID[COG3103] SH3 domain protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000301098 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGC AGACGCTCAC GCTTTGGTGT TGCGTATGGT TAAGCTGTGC CGCTATGCTC 
ACCGCTTGCC TCGATTTCAG TGCCGCGTTG CCCCCTTCCC CAAGCCCCTT CCCAACGCTA
CCCCGCCTCC CAAGTGTGAC CCCGGTCACA CCGCAACCTA CCCGCTCACC GGTGACGATT
ATTCTGGGAC CATCGGCAAC TGCCACACCG ACTACTGCCC AATTTATCGG GCGAGCCGCT
ACCACGGCGA ACATGCGCAG TGGCCCCGGT ACCTCCTTTC CGATTGTGAC CGTGGTTCCG
GTTGATACCG AAGTTCTTCT CGAAGGCCAA CGGGCCAACT GGTACATCGT CCGCTTACCC
GACGGTCAAA CCGGATGGAT GTCGGCTACT GTGCTTGAGG TGGCGCCTGA GATTGCTGCC
AGGGTACCTA TTGCCACACC GTAG
 
Protein sequence
MKPQTLTLWC CVWLSCAAML TACLDFSAAL PPSPSPFPTL PRLPSVTPVT PQPTRSPVTI 
ILGPSATATP TTAQFIGRAA TTANMRSGPG TSFPIVTVVP VDTEVLLEGQ RANWYIVRLP
DGQTGWMSAT VLEVAPEIAA RVPIATP