Gene Aboo_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1416 
Symbol 
ID8828380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1351310 
End bp1353034 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content39% 
IMG OID 
Productglycoside hydrolase family 25 
Protein accessionYP_003483785 
Protein GI289597089 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGC CAATAGTTTG GTTTGTGGTA TTCATACTGA TTCTTAATGC TATATTTTTT 
GCCATAGGTT ATGGTAGCAA TCAAAAAGAG AGTTTATATT TCAAAACATC CTCCAGCATT
AAGGGTATAG ATGTTTCCCA CTGGCAGGGA AATGTGAACT GGACTAAAGT TAAAAATTCC
GGGATAATCT TTGCATTTGT AAAGGCCACA GAGGGGACAT CTTATGTGGA CCCGGATTTT
GAAGAAAATA TGGAGAAGGC ACACGCATCA GGATTGTATG TTGGTGCCTA TCACTTTGCA
GAACCTGAAA ATTATAATGC AAAAGAGGCC GCAGAGCATT TTGTAGATAC CATAAAAACA
TATCTGAAGA GTGGATATTT GAGACCCGTT TTGGATTTAG AAGAAGGATC ATCCTTAGGA
AAAGAGAGCT TATCAAGTTG GGTAAATGAA TTTATGATTG AAGTATTCAA TTTAACGGGT
ATAAAGCCAA TAATTTACAC GAATCCAAAT TATGCTGAAA ACTACCTTGA TTCCTCCGTA
TCTCAATGGA ATCTCTGGAT AGCCAATTAT AGAGTTTCGT CCCCTTCCAC GGGAATTTGG
GACTCCTGGG CATTCTGGCA GTACACAGAC GAGGGAAATG TATCGGGGGT GAGTGGCAAT
GTGGATATGG ATTATTACAA TGGAAATTTA AAATCCCTCA TAGATAATTT TGTTATAGGT
GGCTCGTGTA CTCTCCCCTA TTATGATAGA GCGGGTGCTT TAGGTTATGC TTATAAGTGG
TACTCTTCCG ACAATTCCCA TTACCAGAAA TTTTCAAACT CCAGCGAGGA GAGCACAAAT
TTCGTTTCTC AGGTATTGAT AGCAGGAGGA ATATCTCTCT GGAGAGGATA TGATGGTAAA
GGCGATGGGG CTTTAAATTA CAATGGCTCA ATGATAAATC CAAAGTATCT GAATGAGAAT
CTCAGAGAGT ATCAGAATGC AAAATTTTCG TACTATCTTG CTTCAAATTT TACAGTTCCT
GAATGGATAG AAAAAGGGGA TGTGGTCATA TTTGGAGACT CAAATGGTGA GCATTACATA
TATGCAGGTA TAGTAACATA TAGGAATGAA GACAATCTTT ACATAGCCAC TCATTCTCCC
GATGAATGGA ATGTATCCAT ATCCTCGTTT TTCCCATCTA AGTATGACCT TGTAAATTTT
TACCATATAC CGAATGGAAC CAAGAAATTT ATGCAGGTAT TTCGAGTTAC TGCCACTGCT
CTCAATATTC GAACAGGTCC AAGCACGAGT TATGGCATAA TAGGAACTGT GCCAGAGAAT
CAAGAGTTCG TTGCATACAA TTATAGCATT GATTCATCAG GGCGCAAATG GTGGCAGTTC
TTCTACGATG ACAGGGTGGG TTGGTGTGCT GCATGGTACA CTGAAATGGC ATATTCTGAT
ATATTTGTAG TAAATGTCTC CTCCTCCCTG CATGTTCGCT CTGGGGCTGG AACATCTAAC
ACCATACTTG GCTCAGTTTA TGATGGAATG CTCTTTGCCA AGAAGGGACA GAAATATAAC
AGCGATGAGG ACATCACCTG GTACGAGATA TACTGGGAAA ACAAAAGTGC TTGGATTGCG
GGAAACTATG CAAATTATGT ACCAGAATTT GACATCCCAT ATTTTCTATT TATTATACTT
CTCTTAGCAA TACTCGCATT CAAGAGAAAA TTTAATGGAG ATTAA
 
Protein sequence
MKRPIVWFVV FILILNAIFF AIGYGSNQKE SLYFKTSSSI KGIDVSHWQG NVNWTKVKNS 
GIIFAFVKAT EGTSYVDPDF EENMEKAHAS GLYVGAYHFA EPENYNAKEA AEHFVDTIKT
YLKSGYLRPV LDLEEGSSLG KESLSSWVNE FMIEVFNLTG IKPIIYTNPN YAENYLDSSV
SQWNLWIANY RVSSPSTGIW DSWAFWQYTD EGNVSGVSGN VDMDYYNGNL KSLIDNFVIG
GSCTLPYYDR AGALGYAYKW YSSDNSHYQK FSNSSEESTN FVSQVLIAGG ISLWRGYDGK
GDGALNYNGS MINPKYLNEN LREYQNAKFS YYLASNFTVP EWIEKGDVVI FGDSNGEHYI
YAGIVTYRNE DNLYIATHSP DEWNVSISSF FPSKYDLVNF YHIPNGTKKF MQVFRVTATA
LNIRTGPSTS YGIIGTVPEN QEFVAYNYSI DSSGRKWWQF FYDDRVGWCA AWYTEMAYSD
IFVVNVSSSL HVRSGAGTSN TILGSVYDGM LFAKKGQKYN SDEDITWYEI YWENKSAWIA
GNYANYVPEF DIPYFLFIIL LLAILAFKRK FNGD