| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1509 |
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| Symbol | |
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| ID | 6026694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1592155 |
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| End bp | 1594410 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641594333 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001717647 |
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| Protein GI | 169831665 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0136849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAACA GACGTTTAGC TTACAACAAA GGAGCCGACA GAATGCCAAA ACGATTGGTT
CTGGTAGCCG TCTTCCTGTT CCTAGTCATT GGCTTGGCCG GTAGGAGCGT CGAGGCCAGT
CAGATGGCCG TCGTCACCAA CCCGACGGTG AATTTGCGGG GTGGTGCGGG CACGAACCAC
CCGGTGGTGG GTCAGGCGGG GCAGGGTGCC CGTTTGCCGG TGTTGGGCAA ATCGGGTGAC
TGGGTGCAGG TGCGCCAGGC GAACGGTCAG GCGGCTTGGG TGGCCGGCTG GCTGGTGCGG
TTGGAAGCGG CTCCGGCGTC TGTGGCCCCG ACGCAGCCGG CTACGGCGAC CGGTGGACAG
GTGGCGGTGG TTACCACCGG AGCGGTGAAT TTGCGGGGTG GTGCGGGCAC GAACCACCCG
GTGGTGGGTC AGGCGGGGCA GGGTGCCTGT TTGCCGGTGT TGGGCAAATC GGGTGACTGG
GTGCAGGTGC GCCAGGCGAA CGGTCAGGCG GCTTGGGTGG CCGGCTGGCT GGTGCGGTTG
GAAGCGGCTC CGGCGTCTGT GGCCCCGACG CAGCCGGCTA CGGCGACCGG TGGACAGGTG
GCGGTGGTTA CCACCGGAGC GGTGAATTTG CGGGGTGGTG CGGGCACGAA CCACCCGGTG
GTGGGTCAGG CGGGGCAGGG TGCTCGTTTG CCGGTGTTGG GCAAATCGGG TGACTGGGTG
CAGGTGCGCC AGGCGAACGG TCAGGCGGCT TGGGTGGCCG GCTGGCTGGT GCGGTTGGAA
GCGGCTCCGG CGTCTGTGGC CCCGACGCAG CCGGCTACGG CGACCGGTGG ACAGGTGGCG
GTGGTTACCA CCGGAGCGGT GAATTTGCGG GGTGGTGCGG GCACGAACCA CCCGGTGGTG
GGTCAGGCGG GGCAGGGTGC TCGTTTGCCG GTGTTGGGCA AATCGGGTGA CTGGGTGCAG
GTGCGCCAGG CGAACGGTCA GGCGGCCTGG GTGGCCGGCT GGCTGGTGCG GTTGGAAGCG
GCTCCGGCGT CTGTGGCCCC GACGCAGCCG ACGCCGGTCA CGGCCCCCGG TTCCGTGAAT
CCGACGGACC CGCCGGACCG CACGGTACGG GCCTTGGTCG GCAACGCAGT GGTGGACGTG
GAAGCGGTGG ACGTACGGAG CCAACCCGGG CGCCAGTACA CGGCCATCGC CCAGGCCACA
CGGGGTTTCC GGTTGCCGCT GGTTGCCGAG CGGGGGGGCT GGTACCAGAT CCGGTTGCCG
AACGGCAACC TCGGGTGGGT GGAATCGGCG ACGGTGCGAG TGGATATTGA TACCGCCGGT
CTTCCACCCG TGAACGGTGG TAGTGACGCG GACCCGGATC GGGGGGAAAT CTCGTTTGAC
GCGAGAGTAT CCGGAGACCG GGTGATCATT ACCGTTAGTT CCACGACACC CATCGAGTAT
TCGGCTTTCC GCCTGCCGAA CCCCGACCGG ATTGTCATTG ACGTCGACGG TTTCGCCGGC
GGGCAGGTTC CGGCGACCCA GACCCTGCAG TCACCTGTTG TGAGCACAAT CAGGACCGGG
GAAGCGGACG GGCGCTTCCG GCTGGCCTGC GACGTCAAAC AGGGGCTGGC TCATACCCGC
TACAAGACGG ACCTTTCAGG GGACCGGCGG ACCCTGACCG TGGAGATCTT CGCGGTGGCG
AACGTAATGC AGGGACGGGT CATAGTCCTT GACGCCGGGC ACGGCGGCAG GGATCCAGGC
GCGACCGGGC CCACCGGCGT GAGGGAGAAA GACGTTGTTT TAGCCATCAC CCTGGAAGCG
GCCCAACTAC TCAGGCAGCA GGGAGCCGAG GTAATCCTGA CCCGGCAATC GGATGTGTTC
GTGGAACTCC TGCAACGGGC TGAAATCGCG AACCAGGCCG GCGCCGACGT TTTTGTGAGC
ATCCACGCCA ATGCAAATGT CGATCACTCC AAGCACGGCA CCAGCACCTA CTGGTGGCCT
TATCCGGACG TTATGACTCC GGGTCAAATA GCCGCCAGGG AAAGGTTGGC CGGTGCACTT
CAGACCGCCC TGCTTGCCGG GTTGGGAAGG AACGACCTTG GCTTGTTCCA GGCGCGGTTT
GCTGTGCTGC GGGCTACGAA CATGCCCTCG GCCTTGGTGG AGGTGGCCTT TATATCAAAC
CCCGTTGAGG AAAGACTCCT GGCTGACCCT GCCTTTCAGA ATCGGGCCGC GGCGGCCATC
GCGGCCGGAC TGCAGGATTA CTTCCAGGAA TACTAA
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| Protein sequence | MSNRRLAYNK GADRMPKRLV LVAVFLFLVI GLAGRSVEAS QMAVVTNPTV NLRGGAGTNH
PVVGQAGQGA RLPVLGKSGD WVQVRQANGQ AAWVAGWLVR LEAAPASVAP TQPATATGGQ
VAVVTTGAVN LRGGAGTNHP VVGQAGQGAC LPVLGKSGDW VQVRQANGQA AWVAGWLVRL
EAAPASVAPT QPATATGGQV AVVTTGAVNL RGGAGTNHPV VGQAGQGARL PVLGKSGDWV
QVRQANGQAA WVAGWLVRLE AAPASVAPTQ PATATGGQVA VVTTGAVNLR GGAGTNHPVV
GQAGQGARLP VLGKSGDWVQ VRQANGQAAW VAGWLVRLEA APASVAPTQP TPVTAPGSVN
PTDPPDRTVR ALVGNAVVDV EAVDVRSQPG RQYTAIAQAT RGFRLPLVAE RGGWYQIRLP
NGNLGWVESA TVRVDIDTAG LPPVNGGSDA DPDRGEISFD ARVSGDRVII TVSSTTPIEY
SAFRLPNPDR IVIDVDGFAG GQVPATQTLQ SPVVSTIRTG EADGRFRLAC DVKQGLAHTR
YKTDLSGDRR TLTVEIFAVA NVMQGRVIVL DAGHGGRDPG ATGPTGVREK DVVLAITLEA
AQLLRQQGAE VILTRQSDVF VELLQRAEIA NQAGADVFVS IHANANVDHS KHGTSTYWWP
YPDVMTPGQI AARERLAGAL QTALLAGLGR NDLGLFQARF AVLRATNMPS ALVEVAFISN
PVEERLLADP AFQNRAAAAI AAGLQDYFQE Y
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