10 homologs were found in PanDaTox collection
for query gene GSU1780 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU1780  hypothetical protein  100 
 
 
181 aa  367  1e-101  Geobacter sulfurreducens PCA  Bacteria  normal  0.0245838  n/a   
 
 
-
 
NC_007517  Gmet_1861  putative type IV pilus assembly protein PilO  51.11 
 
 
181 aa  196  1.0000000000000001e-49  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.587528 
 
 
-
 
NC_009483  Gura_1927  hypothetical protein  38.67 
 
 
184 aa  156  1e-37  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2417  putative type IV pilus assembly protein PilO  39.11 
 
 
181 aa  136  1e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3001  hypothetical protein  41.78 
 
 
184 aa  120  9.999999999999999e-27  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000261041 
 
 
-
 
NC_011146  Gbem_1282  hypothetical protein  33.7 
 
 
184 aa  112  4.0000000000000004e-24  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1681  hypothetical protein  26.42 
 
 
184 aa  58.2  0.00000007  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1464  putative type IV pilus assembly protein PilO  25.83 
 
 
182 aa  57.4  0.0000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0134  hypothetical protein  25.78 
 
 
189 aa  51.6  0.000006  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1298  transmembrane protein  23.64 
 
 
181 aa  41.2  0.008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.131644  normal 
 
 
-
 
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