13 homologs were found in PanDaTox collection
for query gene GM21_3001 on replicon NC_012918
Organism: Geobacter sp. M21



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_3001  hypothetical protein  100 
 
 
184 aa  374  1e-103  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000261041 
 
 
-
 
NC_011146  Gbem_1282  hypothetical protein  85.87 
 
 
184 aa  310  1e-83  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1927  hypothetical protein  41.3 
 
 
184 aa  154  6e-37  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1780  hypothetical protein  36.81 
 
 
181 aa  125  4.0000000000000003e-28  Geobacter sulfurreducens PCA  Bacteria  normal  0.0245838  n/a   
 
 
-
 
NC_007517  Gmet_1861  putative type IV pilus assembly protein PilO  38.64 
 
 
181 aa  123  1e-27  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.587528 
 
 
-
 
NC_008609  Ppro_2417  putative type IV pilus assembly protein PilO  36.07 
 
 
181 aa  112  4.0000000000000004e-24  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1681  hypothetical protein  26.57 
 
 
184 aa  64.7  0.0000000008  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1464  putative type IV pilus assembly protein PilO  26 
 
 
182 aa  58.5  0.00000006  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1298  transmembrane protein  25 
 
 
181 aa  48.9  0.00004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.131644  normal 
 
 
-
 
NC_007498  Pcar_0134  hypothetical protein  23.08 
 
 
189 aa  47.4  0.0001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1578  hypothetical protein  35.24 
 
 
178 aa  47  0.0001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.488322  normal  0.0994287 
 
 
-
 
NC_007947  Mfla_1338  putative transmembrane protein  24.73 
 
 
183 aa  45.8  0.0004  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0020  pilus assembly protein, PilO  26.61 
 
 
223 aa  43.9  0.001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
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