9 homologs were found in PanDaTox collection
for query gene Francci3_2990 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_2990  hypothetical protein  100 
 
 
219 aa  422  1e-117  Frankia sp. CcI3  Bacteria  normal  normal  0.224353 
 
 
-
 
NC_009921  Franean1_4814  hypothetical protein  56.61 
 
 
232 aa  209  3e-53  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0860408 
 
 
-
 
NC_007777  Francci3_2816  hypothetical protein  56.61 
 
 
276 aa  173  9.999999999999999e-43  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2438  putative non-heme haloperoxidase  61.68 
 
 
197 aa  147  9e-35  Frankia sp. EAN1pec  Bacteria  normal  0.34557  normal  0.921062 
 
 
-
 
NC_009921  Franean1_2021  hypothetical protein  27.91 
 
 
281 aa  52.8  0.000004  Frankia sp. EAN1pec  Bacteria  normal  0.182904  normal  0.272276 
 
 
-
 
NC_013131  Caci_2772  hypothetical protein  43.96 
 
 
246 aa  50.4  0.00002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1389  outer-membrane type III secretion protein HrcC  27.33 
 
 
699 aa  43.1  0.003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1966  hypothetical protein  35.71 
 
 
530 aa  42  0.007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.52219  normal 
 
 
-
 
NC_013093  Amir_4308  hypothetical protein  40.35 
 
 
253 aa  41.6  0.01  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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