Gene Francci3_2990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2990 
Symbol 
ID3905487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3541141 
End bp3541800 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content69% 
IMG OID637880310 
Producthypothetical protein 
Protein accessionYP_482076 
Protein GI86741676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.224353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGTCCA TGGTTTCGTC GTCATACTTT CATCCGCGCC CCCGTGGATA TGTGGGGGGG 
CCGGGAACCC GTTACTGGCC CAGTGGTGAT CCCACCCACT CGAGAAGAGC CAGTGTGGTC
CTTCTTCCCG GTCGTGGAGA ATCCGCCGAA CATTTCGAGG GCCTAGCTTT CCGGCTCGCG
CTCGACGGCT ATCAGGTGAC GTTTCTCGAC CATGGGAGAG ACACCGTCCT CGCCCTTGGT
GAGGCGCGTG CCCCCGATGG TCCGTTCGTC CTGCTGGGTT CGGACAGCGG GGCCCTGCGG
GCGTTGGTCG GCGCCGGTTC GCCAGCGGTC CGGCCGGATG CCCTCGTGTT GCTCGACCTG
CCGCTGGTGT ACCGGAAGAT CGCGGGCGAG GATCCGGGAC AACCGATCCC ACGGTCGCTT
CCCGACCTGC CGATCCTGTT GCTCCATGCC GAGCGCGACG AGGTCAGCCC GCTTGCGCTG
GCGCGCATGA TGACGCGGAC CGCGCGCCGG GCCCGGCTGG CGTCGCTGCC CGGGGGGCAT
GGCGTGCTCG CCGGCCCCGG CCGGCGTGCG GTCGGCGCGC ACATCCTGCT GTTCCTCGAG
AACCTCCGTG TCCCGCGGCT GGCCCCACGG CAACGGCAGC GGGACCGGTC GGTCGACTGA
 
Protein sequence
MSSMVSSSYF HPRPRGYVGG PGTRYWPSGD PTHSRRASVV LLPGRGESAE HFEGLAFRLA 
LDGYQVTFLD HGRDTVLALG EARAPDGPFV LLGSDSGALR ALVGAGSPAV RPDALVLLDL
PLVYRKIAGE DPGQPIPRSL PDLPILLLHA ERDEVSPLAL ARMMTRTARR ARLASLPGGH
GVLAGPGRRA VGAHILLFLE NLRVPRLAPR QRQRDRSVD