Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2990 |
Symbol | |
ID | 3905487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3541141 |
End bp | 3541800 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637880310 |
Product | hypothetical protein |
Protein accession | YP_482076 |
Protein GI | 86741676 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.224353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGTCCA TGGTTTCGTC GTCATACTTT CATCCGCGCC CCCGTGGATA TGTGGGGGGG CCGGGAACCC GTTACTGGCC CAGTGGTGAT CCCACCCACT CGAGAAGAGC CAGTGTGGTC CTTCTTCCCG GTCGTGGAGA ATCCGCCGAA CATTTCGAGG GCCTAGCTTT CCGGCTCGCG CTCGACGGCT ATCAGGTGAC GTTTCTCGAC CATGGGAGAG ACACCGTCCT CGCCCTTGGT GAGGCGCGTG CCCCCGATGG TCCGTTCGTC CTGCTGGGTT CGGACAGCGG GGCCCTGCGG GCGTTGGTCG GCGCCGGTTC GCCAGCGGTC CGGCCGGATG CCCTCGTGTT GCTCGACCTG CCGCTGGTGT ACCGGAAGAT CGCGGGCGAG GATCCGGGAC AACCGATCCC ACGGTCGCTT CCCGACCTGC CGATCCTGTT GCTCCATGCC GAGCGCGACG AGGTCAGCCC GCTTGCGCTG GCGCGCATGA TGACGCGGAC CGCGCGCCGG GCCCGGCTGG CGTCGCTGCC CGGGGGGCAT GGCGTGCTCG CCGGCCCCGG CCGGCGTGCG GTCGGCGCGC ACATCCTGCT GTTCCTCGAG AACCTCCGTG TCCCGCGGCT GGCCCCACGG CAACGGCAGC GGGACCGGTC GGTCGACTGA
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Protein sequence | MSSMVSSSYF HPRPRGYVGG PGTRYWPSGD PTHSRRASVV LLPGRGESAE HFEGLAFRLA LDGYQVTFLD HGRDTVLALG EARAPDGPFV LLGSDSGALR ALVGAGSPAV RPDALVLLDL PLVYRKIAGE DPGQPIPRSL PDLPILLLHA ERDEVSPLAL ARMMTRTARR ARLASLPGGH GVLAGPGRRA VGAHILLFLE NLRVPRLAPR QRQRDRSVD
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