34 homologs were found in PanDaTox collection
for query gene Francci3_2839 on replicon NC_007777
Organism: Frankia sp. CcI3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007777  Francci3_2839  McrBC 5-methylcytosine restriction system component-like  100 
 
 		 416 aa  824    Frankia sp. CcI3  Bacteria  normal  1  normal  0.117814 
 
 
-
 
NC_013595  Sros_7821  McrBC 5-methylcytosine restriction system component-like protein  47.18 
 
 		 406 aa  256  6e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_3300  5-methylcytosine restriction system component- like protein  40.59 
 
 		 398 aa  229  6e-59  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6960  hypothetical protein  40 
 
 		 405 aa  208  2e-52  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00920086  normal  1 
 
 
-
 
NC_013172  Bfae_05460  McrBC 5-methylcytosine restriction system component  41.08 
 
 		 393 aa  205  1e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_0863  McrBC 5-methylcytosine restriction system component-like protein  40.15 
 
 		 418 aa  201  1.9999999999999998e-50  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_0976  hypothetical protein  39.35 
 
 		 430 aa  185  2.0000000000000003e-45  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0362174 
 
 
-
 
NC_008697  Noca_4768  McrBC 5-methylcytosine restriction system component-like protein  39.61 
 
 		 407 aa  141  1.9999999999999998e-32  Nocardioides sp. JS614  Bacteria  normal  1  normal  0.393001 
 
 
-
 
NC_009338  Mflv_3197  McrBC 5-methylcytosine restriction system component-like protein  28.82 
 
 		 446 aa  94  5e-18  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0398257  normal  1 
 
 
-
 
NC_013158  Huta_1703  McrBC 5-methylcytosine restriction system component-like protein  28.94 
 
 		 421 aa  93.2  7e-18  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0806  McrBC 5-methylcytosine restriction system component-like protein  25.53 
 
 		 383 aa  82.4  0.00000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0894928  hitchhiker  0.000053751 
 
 
-
 
NC_013595  Sros_2402  McrBC 5-methylcytosine restriction system component-like protein  27.89 
 
 		 431 aa  67  0.0000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.073965 
 
 
-
 
NC_011757  Mchl_3309  IQ calmodulin-binding- domain protein  28.37 
 
 		 426 aa  64.7  0.000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_1862  hypothetical protein  28.3 
 
 		 431 aa  56.6  0.0000007  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_1386  McrBC 5-methylcytosine restriction system component-like protein  23.5 
 
 		 411 aa  54.7  0.000003  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_2863  5-methylcytosine restriction system component- like protein  27.91 
 
 		 404 aa  54.3  0.000004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.104188  normal  1 
 
 
-
 
NC_013203  Apar_1213  5-methylcytosine-specific restriction enzyme subunit McrC  24.32 
 
 		 351 aa  53.5  0.000006  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.816052 
 
 
-
 
NC_011769  DvMF_0230  McrBC 5-methylcytosine restriction system component-like protein  22.16 
 
 		 397 aa  53.1  0.000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.012519 
 
 
-
 
NC_009665  Shew185_1981  hypothetical protein  23.45 
 
 		 428 aa  50.8  0.00004  Shewanella baltica OS185  Bacteria  normal  0.51853  n/a   
 
 
-
 
NC_009801  EcE24377A_3330  hypothetical protein  25 
 
 		 428 aa  50.8  0.00005  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007969  Pcryo_0940  5-methylcytosine-specific restriction enzyme subunit McrC  30.25 
 
 		 374 aa  50.4  0.00006  Psychrobacter cryohalolentis K5  Bacteria  normal  1  unclonable  0.0000244795 
 
 
-
 
NC_012912  Dd1591_3669  putative 5-methylcytosine restriction system component  25 
 
 		 436 aa  50.1  0.00008  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_007355  Mbar_A3270  hypothetical protein  19.81 
 
 		 453 aa  50.1  0.00008  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0179938  normal  0.335413 
 
 
-
 
NC_010424  Daud_0401  McrBC 5-methylcytosine restriction system component-like protein  28.05 
 
 		 435 aa  49.3  0.0001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.204424  n/a   
 
 
-
 
NC_009253  Dred_0026  McrBC 5-methylcytosine restriction system component-like protein  23.83 
 
 		 334 aa  48.9  0.0002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.579056  n/a   
 
 
-
 
NC_010159  YpAngola_A1240  hypothetical protein  23.66 
 
 		 438 aa  48.1  0.0003  Yersinia pestis Angola  Bacteria  normal  0.0689849  hitchhiker  0.000177876 
 
 
-
 
NC_009671  Oant_4726  hypothetical protein  24.91 
 
 		 422 aa  46.6  0.0008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.445039  n/a   
 
 
-
 
NC_007960  Nham_4503  5-methylcytosine-specific restriction enzyme subunit McrC  30.26 
 
 		 361 aa  46.6  0.0008  Nitrobacter hamburgensis X14  Bacteria  normal  0.544571  n/a   
 
 
-
 
NC_007005  Psyr_3724  hypothetical protein  24.19 
 
 		 418 aa  46.6  0.0008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009800  EcHS_A4531  hypothetical protein  31.07 
 
 		 267 aa  45.4  0.002  Escherichia coli HS  Bacteria  normal  0.814257  n/a   
 
 
-
 
NC_009524  PsycPRwf_1353  5-methylcytosine-specific restriction enzyme subunit McrC  30.28 
 
 		 363 aa  45.1  0.002  Psychrobacter sp. PRwf-1  Bacteria  normal  1  hitchhiker  0.000239039 
 
 
-
 
NC_007778  RPB_1591  hypothetical protein  26.74 
 
 		 429 aa  45.1  0.002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_2471  5-methylcytosine restriction system component- like protein  23.88 
 
 		 428 aa  44.3  0.004  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.248512 
 
 
-
 
NC_007509  Bcep18194_C7439  McrBC 5-methylcytosine restriction system component-like  25.49 
 
 		 445 aa  43.9  0.006  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>