11 homologs were found in PanDaTox collection
for query gene Hoch_2863 on replicon NC_013440
Organism: Haliangium ochraceum DSM 14365



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013440  Hoch_2863  5-methylcytosine restriction system component- like protein  100 
 
 
404 aa  807    Haliangium ochraceum DSM 14365  Bacteria  normal  0.104188  normal 
 
 
-
 
NC_009253  Dred_0026  McrBC 5-methylcytosine restriction system component-like protein  25.42 
 
 
334 aa  62  0.00000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.579056  n/a   
 
 
-
 
NC_008312  Tery_3582  McrBC 5-methylcytosine restriction system component-like  21.34 
 
 
405 aa  59.3  0.0000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3300  5-methylcytosine restriction system component- like protein  29.2 
 
 
398 aa  57  0.0000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2839  McrBC 5-methylcytosine restriction system component-like  28.44 
 
 
416 aa  50.8  0.00005  Frankia sp. CcI3  Bacteria  normal  normal  0.117814 
 
 
-
 
NC_013131  Caci_6960  hypothetical protein  28.52 
 
 
405 aa  49.7  0.00009  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00920086  normal 
 
 
-
 
NC_007355  Mbar_A3270  hypothetical protein  21.43 
 
 
453 aa  49.3  0.0001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0179938  normal  0.335413 
 
 
-
 
NC_007958  RPD_1974  hypothetical protein  25.38 
 
 
434 aa  49.7  0.0001  Rhodopseudomonas palustris BisB5  Bacteria  decreased coverage  0.00010435  normal  0.369682 
 
 
-
 
NC_012793  GWCH70_1386  McrBC 5-methylcytosine restriction system component-like protein  22.85 
 
 
411 aa  48.5  0.0002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_1011  5-methylcytosine restriction system component-like protein  23.44 
 
 
460 aa  46.6  0.0008  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.00000144218  n/a   
 
 
-
 
NC_008541  Arth_0863  McrBC 5-methylcytosine restriction system component-like protein  31.71 
 
 
418 aa  44.7  0.003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>