Gene Noca_4768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4768 
Symbol 
ID4595368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp69343 
End bp70566 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content68% 
IMG OID639772557 
ProductMcrBC 5-methylcytosine restriction system component-like protein 
Protein accessionYP_919217 
Protein GI119714075 
COG category[V] Defense mechanisms 
COG ID[COG4268] McrBC 5-methylcytosine restriction system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.393001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAGGG CTGACCTCGA GCATCTCACC GAGGGGCAGC GTCTCTACCC GGTCGACCTG 
ACACGCGCCG AGGCGGCTGC CTTGAACCGG AGCGGCCTCG TGACCGCTCA GCCCGACGTC
GATGGTTGGC GCGTCACGGC TGAGCACGCC GTCGGCGCGG TCCGCCGTGG CGACCTGGTC
GTTCGCGTGA CACCGAAAGT CGGCGCCGCG AAGGTGCTGA CGTTGCTCGC CCGGGCTCAG
GGCGTGCGCG GGCTGAAGGT GGACCCGGAG CTCGTGGGGG TCGCTCCTCA CGCGGATATT
TCCGCGGTAC TCGCCGTCCT CTTCGCCCAG GAGGCGGCCA CCGCCATGGC CGCCGGACCA
CTTCGCGGCT ACCGCAGCGA GGACCAGACT CTGCCAGTAC TCCGCGGACG CGTCCGGCTG
CGAGAGCAGC ACCTGCGCCG CTTCGGACTC CCTGTGCCGC TCGAGGTCAC CGTCGACGAG
TGGACCCTGG ACACCGACGA CAACCGGCGC ACCCGTGCCG CCGCGACCGC ACTCCTTGCC
TTGCCAGGCG TGCCCGAACA CAGCACCCAG GCGCTGAGAC GGCTCGACCG GTTGCTCGGC
GAGGCGAAGC TCCTCGCGCC CGGTGCCCCG CTCGAACCTT GGACCCCAAC ACGCCTCAAC
GTAAAGATGC ATCGGCTCCT CCACCTTGCC GACGTCGTCC TGGCGCACAC GAGCGTGGAG
CACGAGGCCG GCGCGACTCA GACGCACGGA TTCGTGGTGA ACATGGCGTG GCTGTTCGAG
ACCCTTATCG CCAGGCTCCT GGAGGAGCAG ACACTGGGGC TGGTTCCGCA GCAGACGATG
CCGCTCGACA CTCTCGGCCG ACTTAGCATC AAGCCGGATC TGCTGTTCGA CGGCCCGGGT
GGCGTGGTGG CGGTAGCGGA CACGAAGTAC AAGCTGCTCG ATGACAACGG CAAAGTCCCT
AACGCAGACG TCTACCAACT TGTCACCTAC TGCGCCCGGC TCGGGCTGAG CACCGGGCAC
CTCATCTACT CGTCCGATGA ACCGGGACCG GACCCGTTTG GCATCGTCGG CACGAACGTG
CTGCTCGTCG TCCACGCGGT CGACGTCAGC CGACCTGTCG ACGTGATCGA GCAGCAAGTG
CGGGAGATCG GCCTACGACT GTTGGCAACT GGAATCCGAG AATCCGGCAG TACCGAAGCC
CGACCTCTCA CCCCGGCCGG CTGA
 
Protein sequence
MTRADLEHLT EGQRLYPVDL TRAEAAALNR SGLVTAQPDV DGWRVTAEHA VGAVRRGDLV 
VRVTPKVGAA KVLTLLARAQ GVRGLKVDPE LVGVAPHADI SAVLAVLFAQ EAATAMAAGP
LRGYRSEDQT LPVLRGRVRL REQHLRRFGL PVPLEVTVDE WTLDTDDNRR TRAAATALLA
LPGVPEHSTQ ALRRLDRLLG EAKLLAPGAP LEPWTPTRLN VKMHRLLHLA DVVLAHTSVE
HEAGATQTHG FVVNMAWLFE TLIARLLEEQ TLGLVPQQTM PLDTLGRLSI KPDLLFDGPG
GVVAVADTKY KLLDDNGKVP NADVYQLVTY CARLGLSTGH LIYSSDEPGP DPFGIVGTNV
LLVVHAVDVS RPVDVIEQQV REIGLRLLAT GIRESGSTEA RPLTPAG