10 homologs were found in PanDaTox collection
for query gene Francci3_2389 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007777  Francci3_2389  putative integral membrane protein  100 
 
 		 454 aa  871    Frankia sp. CcI3  Bacteria  decreased coverage  0.00613681  normal  0.0209947 
 
 
-
 
NC_007777  Francci3_1062  membrane protein  47.95 
 
 		 615 aa  353  2e-96  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_3937  membrane protein  46.42 
 
 		 808 aa  341  1e-92  Frankia sp. CcI3  Bacteria  normal  0.183856  normal  0.16689 
 
 
-
 
NC_009921  Franean1_0791  O-antigen and teichoic acid-like export protein  46.32 
 
 		 1273 aa  326  7e-88  Frankia sp. EAN1pec  Bacteria  normal  0.750231  normal  0.326449 
 
 
-
 
NC_009664  Krad_0559  hypothetical protein  38.29 
 
 		 443 aa  234  2.0000000000000002e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.309462  normal  0.837704 
 
 
-
 
NC_013235  Namu_3189  hypothetical protein  38.48 
 
 		 428 aa  222  9.999999999999999e-57  Nakamurella multipartita DSM 44233  Bacteria  normal  0.127447  hitchhiker  0.0000558428 
 
 
-
 
NC_013757  Gobs_0371  hypothetical protein  36.62 
 
 		 431 aa  175  9.999999999999999e-43  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_1822  hypothetical protein  29.5 
 
 		 416 aa  52  0.00002  Kineococcus radiotolerans SRS30216  Bacteria  unclonable  0.00000473849  normal  0.0325575 
 
 
-
 
NC_013947  Snas_6390  hypothetical protein  24.9 
 
 		 422 aa  51.6  0.00003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008010  Dgeo_2502  O-antigen and teichoic acid-like export protein  33.33 
 
 		 416 aa  44.7  0.003  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
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