Gene Snas_6390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6390 
Symbol 
ID8887616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6742922 
End bp6744190 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003515099 
Protein GI291303821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG GGCGGCGGCT TTCCTGGGGT CTTGCCGACC AAGCGGTCAT CGCCGCCGCC 
AACGCGGGCA ACGGACTGCT CGCCACCGTC TTCCTGCCCC CCGCCGAGGC GGGCATCGTG
CTGGTCTGCC TGGCCACCGT CTACGTCGCC ATGGGCCTCA ACCGGGCCTT CATCGGCGAC
GTCCTGCTCG CCCAGGCCTC CCGCTTCGAG GGCACCAGCC GCCGCCGCAT GCACACCGAC
GCGATCGCCA CCGCCTGCTG TTCCGGGACC GCCGTGGCCG TGGTGCTCGC GCTGCTGTGG
CTGCTGTGGC CCGGCCGACT GCTGGACCCG CTGATCTACC TGGTCCCCTT CATCCCGGCA
CTGTTCGCCC ACGACACCGC CCGCTACTCC TACCAGTCGC AATTGCGGCA GCGCAGCGCC
TTCGTCATCG ACATCGCCTG GGTCCTGGTC CAGGGTGGCC TGGTCGGCAT CGGTGCGGCA
CTCGGCGCCC TGTCCGGGCC CTGGCTGCTG GTCGCCTGGG GACTGGGCGC CTGCATCGGC
GCCATCGTCT ACCTGCTGCG CGGCGGCATC GTCCCGTGGC GGGGACGGCC GGTGCGCTGG
CTGGCCCACA CCCGCAAACT GTCGGTGTGG TTCACCGGCT CGGCCGTCAT CGGCCAGGCC
CAGATCCAGC TGATCGCGCT GCTGATCCCC AGCCTGCTGG GCGCGGCGGC CTTCGCCGGA
CTGCGGCTGG CGCACCTGGT GATCCTGCAA CCGATCCAGA ACCTGGTGCT CGCCTCGATG
GGCCTGCTGG TGCCCCGTAC CTCCACCCTG ACCGAGGCCG GGAACATCGA GGGACTGCGC
AACCAGACGA AGAAGGTCGT CGTGATCGCG CTGGGCCTGG CCGTGGTGCT GTTGGCCGTG
GTCACCCTCG CCGCCGAGCC GGTGCTGAGC TGGTACCAGG GCGGCGCCTA CGCCGAGGTC
GCGCCGCTGG CCTGGCCGGT GGGGATCCAG GCCGGTATCT ACCTGCTCCA GATCCCGTTC
ACCGCGACGG TGCGCGGCAT GCGACAGGGC AAACTCGTCT TCCTCCAGTA CGCGCTGTTC
ACCGTCACCA GCCTGCTGGG CGTCGGCATC GGCGCCACCA CCTTCGGCCT GACCGGCGCC
GCCTGGGGGC TCACCGTCGG TTCGGCCGTC GGCCTGGCCG TGATGATCTA CCTGGCGATG
TACGCGATGC GGCAGTTGAC CACGCCGCCG GTGCGTCAGT CCCTGGTACC CGCCGAGAGC
TCGGCGTAG
 
Protein sequence
MTIGRRLSWG LADQAVIAAA NAGNGLLATV FLPPAEAGIV LVCLATVYVA MGLNRAFIGD 
VLLAQASRFE GTSRRRMHTD AIATACCSGT AVAVVLALLW LLWPGRLLDP LIYLVPFIPA
LFAHDTARYS YQSQLRQRSA FVIDIAWVLV QGGLVGIGAA LGALSGPWLL VAWGLGACIG
AIVYLLRGGI VPWRGRPVRW LAHTRKLSVW FTGSAVIGQA QIQLIALLIP SLLGAAAFAG
LRLAHLVILQ PIQNLVLASM GLLVPRTSTL TEAGNIEGLR NQTKKVVVIA LGLAVVLLAV
VTLAAEPVLS WYQGGAYAEV APLAWPVGIQ AGIYLLQIPF TATVRGMRQG KLVFLQYALF
TVTSLLGVGI GATTFGLTGA AWGLTVGSAV GLAVMIYLAM YAMRQLTTPP VRQSLVPAES
SA