| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3937 |
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| Symbol | |
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| ID | 3906896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4712863 |
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| End bp | 4715289 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637881264 |
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| Product | membrane protein |
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| Protein accession | YP_483016 |
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| Protein GI | 86742616 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.183856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.16689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACA TCGACGTGGA CCTGAGAGCC ACGGGTGGGG AGGACGACTC CCCACCCGAG
GGTTCCCCTG ACGAGACCCG GTACGTGCCA CGATCCCAGC GTCCCGCGCG GGCGACCGGG
CAGCGTCCCG GAGAGCGGAC CGAACGTCTC GGCGAAGGGT TCGAACGCCG TGGCGGCCGC
CGACCCGGCG AGGTTTTCGA GGTGTCCACG GGGCCGATCC GCCCGCAGCC CGCTCCGGCG
CCGGCGCCGC GGCCGGAATC CGGGGCGGGC GAGCAGACCA TCAAGGTCTC TGGACTGCCG
TTGATCCGCC GCCCGCCCCC GGGTACCGTG CGGACCGGCC CGGTGCGGCC CCACGGCGAT
CCGTCGGAGC AACGGCCCAC CGCTTCCCCG GGCGAGATCT CCGTGAGCCG GGTGCCAACG
GCCGGGAAGG CGGGAGACGG GAAGGCGGGA GAACCGTCGG GCGAGGCCGG GGGAAGACCG
CCAGTCGACC CGGTCCGCCC CGCGGGGCCG GTGTCCGGGC GGTCCGGGCC CGCGATCCAG
CCGCCCGACG TCGTCACCGC CACGATGGAC CTGAGCGCGC TGCAACGCCG GCTGCGGGCG
GAGAAGACCG AGCTCCTCCG GCGGGTCGAG GGGCAGACTC CCCGGCATCG CCGCTCGGAC
CGGCGGGCGC GTCGAACCGA CGAGACCGAT CCGGAGAGCA CACAGATCTT TCCGCGGCCG
CCCCCCGCCG GGCGTGGCGG CCGATTTCCC GGGGCGGGCA CCGCGCGGTC CCGCGGTCGA
CGAGGGCCCG CCGCGACGGG CGGCGGCGAG CGGGCCGCCG CGGCCGCGTC CTTCGGGCCG
GGGCCCGGTA ACGGGGCCGA CGGCCTGGTG GACGATCTGA CCGGCGACGA GGGTCCGGGC
CGCGAGGGTC CGGGCCGCGA GGGTCCGGGC CGCGAGGGTT CCGGCGGCCG TGGCGGAGCC
AGGTCGAAGG CGATCTGGAC GCTGGCGGAC CAGGCCGTCT CCAGTGCGAC GAACGCCGCG
GTCTCGTTCC TGATCGCCCA TCAGGTCAGC GACGTCGAGT ACGGCGCGTT CGGTATTGCG
TACACGTTGT TCTCCATCGT CATCGGCCTG GTCCGCGCCG GAAGCTGCAT GCCGCTGAGC
ATGTTCTACT CGGGTGCCAC TCGGAGCGAC TTCCGGGCGG CGGCCACCGC CACCACCGGC
TCGTCGTTCG TCTTCGGTGT GGCCGTGGGA ATCGCGTTCG TCGGTCCGGG TCTGCTCCTC
GGCGGCCCGG TCGGGTCGTC GTTGTCGGCG ATGGGCCTCG TGCTGCCCGG CCTGCTGCTG
CAGGATGCGT GGCGCTATGT CTTCTTCGCG ATGGGGAAGC CCTTCGGCGC CTTCGTCAAC
GACACCGTCT GGGCGGTCGT CCAGATTTTC GGGATCTTCC TGCTCATCCA CCGCGGTGTG
ACCGCATCCC CGCCGCTGCT GCTCGCCTGG GGGGCCTCGG CTCTCGTCGC GGCCCTGCTG
GGGATAGCCC AGGCCGGCTT CTGGCCGTCG CCCGGCGAGA CCCTTCGATG GCTCCGCAGG
AACAAGTCGA ACTCCGCCTA TCTGGCGGCG GAGTTCATCA CCGTCCAGGG CGCGATGCAG
ACCTCGCTGC TGGTGATCGG AGCGGTGGGT TCGCTGGCGA CGGTGGGCGC CCTGCAAGGT
GCGCGCACGC TGCTCGGCCC GACCACGGTG GTCGGGGTGG GGGTCGTGAG CTTCGCGTTG
CCGGAGTTCT CCAAGCGGAC CTCCATGACC CGCCACGCCC GGGAGCGCGC CGCCTACGCT
CTCTCGGCCC TCGTCCTCGC CATCGGCACG GCGTGGAGCC TGATCTTCTA CCTCCTTCCG
GAACGTTACG GCCAGGCGTT GTTGGGCGAC TCGTGGGACG GCGTCAGGAA CATCCTGGGG
CTGTCGATTC TGCACTATCT GGCCGCGTCG GTCCCGGTCG GACCGGCCTG CATGGTCTAC
GCACTCGGAA AAGCCAAGAT CACATTTCGG GTCAATGCGG TCTTTGCGCC GATGTTGTTT
GGTTTTCCTA TCATTGGGTT GCTTGTCGGG GAGGCGCGGG GTGCGGTCGT CGGCTATAAC
ATTGCTTTCT GGTCCATTGC GCCGGTGTGG TTTGTGCTGC TCCGTCGACT CGCTCGGGAG
CACGACGCGG AGCAGGCCGC GCTGCGGGCG GCGCGGGGCG GCTCCGGGCC TGACCCCGCC
CCGGCGGGGC CGGGAGGACG AGAGCTGCCG CGCCCGCGCC GGGCCGGGAT GAGCGACGCA
CGTCGGTCGA GACGGTCGAA CGCTGGCGAA TCTGACCATC GAATGGATCC CGTGGATGAT
GTCGAGGGTA TGGATGTCGC TCCGGAGCAC GGCCCTCGCC GGCCTGGTCG CGGAACCGGA
TCGCGGCGTG GTGGGCGGGG CACCTGA
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| Protein sequence | MTDIDVDLRA TGGEDDSPPE GSPDETRYVP RSQRPARATG QRPGERTERL GEGFERRGGR
RPGEVFEVST GPIRPQPAPA PAPRPESGAG EQTIKVSGLP LIRRPPPGTV RTGPVRPHGD
PSEQRPTASP GEISVSRVPT AGKAGDGKAG EPSGEAGGRP PVDPVRPAGP VSGRSGPAIQ
PPDVVTATMD LSALQRRLRA EKTELLRRVE GQTPRHRRSD RRARRTDETD PESTQIFPRP
PPAGRGGRFP GAGTARSRGR RGPAATGGGE RAAAAASFGP GPGNGADGLV DDLTGDEGPG
REGPGREGPG REGSGGRGGA RSKAIWTLAD QAVSSATNAA VSFLIAHQVS DVEYGAFGIA
YTLFSIVIGL VRAGSCMPLS MFYSGATRSD FRAAATATTG SSFVFGVAVG IAFVGPGLLL
GGPVGSSLSA MGLVLPGLLL QDAWRYVFFA MGKPFGAFVN DTVWAVVQIF GIFLLIHRGV
TASPPLLLAW GASALVAALL GIAQAGFWPS PGETLRWLRR NKSNSAYLAA EFITVQGAMQ
TSLLVIGAVG SLATVGALQG ARTLLGPTTV VGVGVVSFAL PEFSKRTSMT RHARERAAYA
LSALVLAIGT AWSLIFYLLP ERYGQALLGD SWDGVRNILG LSILHYLAAS VPVGPACMVY
ALGKAKITFR VNAVFAPMLF GFPIIGLLVG EARGAVVGYN IAFWSIAPVW FVLLRRLARE
HDAEQAALRA ARGGSGPDPA PAGPGGRELP RPRRAGMSDA RRSRRSNAGE SDHRMDPVDD
VEGMDVAPEH GPRRPGRGTG SRRGGRGT
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