| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1062 |
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| Symbol | |
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| ID | 3905308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1263975 |
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| End bp | 1265822 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878396 |
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| Product | membrane protein |
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| Protein accession | YP_480173 |
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| Protein GI | 86739773 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCACG GAGAGGACGG ACGGCGGTGG ATCAATGAGT TCGGCCACCG ACCCCCGGCA
AAAGACGATC ATCAGGACTC TCCGCGATCC CTCCACCGTC CGAGTACCAC CCGGCGGAGG
GCCGGGTGGG CTCCGGTGAC CGGCCCGGAC ACATCCGCGC CGGCCACGGC CCAGCAGCAC
GAGTCACCAC GCCCCCGGAC GGAACCCGTG CCGGAGGTCA CCGCCGCCCT GTCGCCGCGA
CCGGAACAGT TCGACCGGGA GCGGACCCAG GTCATCCGCG GCCTGCGCGG CCGCCGGATC
CCGGCCGTGG AAGCCTTCGG GACGGCACTG GACGGGCCGA CCCCCGAGGG GCTACTCCCC
CTGTGGGGTC CCGCGACCGG CGAATGGCTC ATCCCGCCGA TCGGCCGCGG CGAGATCCAC
CGGGGGCGCG AGGCACCGGC AGTCCCGGAT TGTGGGGAAC CGGTCGACTA CGGGCTGACC
ATCCTGGACG ACGGCGGTCC GGCCGGTGGT CGCCACCATG ACGAGCGACC GACCCGGGGT
TCCAGCCGCT CGCGGGCCAT CTGGACACTC GTCGACCAGG TGCTCTCCAG CGGGACGAAC
GCCGTGATGT CCTTCGTCAT CGCCCACAGC GTCAGCAAGT CCGAGTTCGG GGCCTTCGCC
GTCGCCTTCG CGATCTTCTC ATTGATGATC GGGTTCTCGA AGGCTGTCGG CACCGCTCCG
CTGGGGATGA AGTTCTCCGA CGTGCCGCCG CGGGTGTTTC GGGTGGCCGG CGCGGCGGGG
ACCGGCACCG CCCTCGTGAT CGGGCTGGTC TGCGGGGTCG TGACGCTTGC CGTCGGTGCG
GCGATGGGCG GCTCGGTCGG CGCCTCGCTG GTCGCGATGG GACTGGTCTT TCCCACGCTG
CTGCTCCAGG ACGCCTGGCG GCAGGTCTTC TTCGCCGAGG GTCGCCCGGC CGCCGCCGCC
GCCAACGACG GGATCTGGGC GATCGTCCAG TTCGCCGCCA TCTACGCGCT GATCGTCCGC
GACGTCTCCA CCTCGTGGGC GATGCTGCTG GCCTGGGGTG GCGCCGCCGC GGTCGCCGCC
ATGCTGGGCG TCACGCAGGC CGGCTTCAAG CCGGCGCCGA GCCTCGTGCG CCAGTGGGTC
GTCGAACACC GCGATGTCAA CGGGTACATG AGCGCCGAGT ACCTCACCGT CCAAGGCGCC
CAGCAGGCAT CCACTCTGCT GCTCGGTACG CTGGGCGCGA TCGACCTGGT CGGCGCGCTG
CGCGGGGTGC AGACTCTGCT CGGACCGACG ACCATTCTCG CGGTCGGGAT CGTGAGCTGG
GCCATCCCCG AGTTCTCCCG CCGCAAGGAC CTCTCGGCCG CAGCCCGGGT CCGCGCCGCC
TACGCCCTGT CCGCGGTGAT CGTCGCGGCC GGCGCCGCCT GGGGGACGAT CTTTCTCGTC
CTGCCGACGA GCATCGGGCA CTCGCTGCTC GGCCAGACCT GGGAGCAGAC CCACGACCTG
CTGGCGCTGT CCATCGTGCA GCAGGCGGGC CCCGCGGCGA CGGTCGGGCC GGCCTGCATG
CTCTACGCGC TCGGCAAGGC CAAGCTCACC TTCCGCGCGA ATGCGGTGCT CGCCCCCCAG
CTTGTCGTCT ATCCGATCGT CGGTCTGGAG ATCGGCGGCG GCACCGGCGC GGTCTGCGGT
TACATACTTG CCTTCTGGGT GACCGTCCCC ATCTGGTTCA TCCTCGTCCG CCGGGCCGCA
CGGGAGGTGG AACGGGACAC GGCGATCGCC CTTTCCGGCG AGCCGGCCGG ACCGGCCGTA
CAGGGCCGAG TTCCGGAGCA CCCGACCGGG ACCGGCAATG ATCAATGA
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| Protein sequence | MRHGEDGRRW INEFGHRPPA KDDHQDSPRS LHRPSTTRRR AGWAPVTGPD TSAPATAQQH
ESPRPRTEPV PEVTAALSPR PEQFDRERTQ VIRGLRGRRI PAVEAFGTAL DGPTPEGLLP
LWGPATGEWL IPPIGRGEIH RGREAPAVPD CGEPVDYGLT ILDDGGPAGG RHHDERPTRG
SSRSRAIWTL VDQVLSSGTN AVMSFVIAHS VSKSEFGAFA VAFAIFSLMI GFSKAVGTAP
LGMKFSDVPP RVFRVAGAAG TGTALVIGLV CGVVTLAVGA AMGGSVGASL VAMGLVFPTL
LLQDAWRQVF FAEGRPAAAA ANDGIWAIVQ FAAIYALIVR DVSTSWAMLL AWGGAAAVAA
MLGVTQAGFK PAPSLVRQWV VEHRDVNGYM SAEYLTVQGA QQASTLLLGT LGAIDLVGAL
RGVQTLLGPT TILAVGIVSW AIPEFSRRKD LSAAARVRAA YALSAVIVAA GAAWGTIFLV
LPTSIGHSLL GQTWEQTHDL LALSIVQQAG PAATVGPACM LYALGKAKLT FRANAVLAPQ
LVVYPIVGLE IGGGTGAVCG YILAFWVTVP IWFILVRRAA REVERDTAIA LSGEPAGPAV
QGRVPEHPTG TGNDQ
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