28 homologs were found in PanDaTox collection
for query gene Ent638_R0027 on replicon NC_009436
Organism: Enterobacter sp. 638



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009436  Ent638_R0027  SRP RNA; RNA component of signal recognition particle  100 
 
 		 118 bp  234  4.0000000000000004e-60  Enterobacter sp. 638  Bacteria  normal  0.131699  normal  1 
 
 
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CP001637  EcDH1_R0068  SRP RNA; RNA component of signal recognition particle  95.76 
 
 		 118 bp  194  3e-48  Escherichia coli DH1  Bacteria  normal  0.470649  n/a   
 
 
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NC_010468  EcolC_R0082    95.76 
 
 		 118 bp  194  3e-48  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
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NC_009800  EcHS_A4735  bacterial signal recognition particle RNA  95 
 
 		 100 bp  159  2e-37  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
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NC_011353  ECH74115_0545  Bacterial signal recognition particle RNA  94.9 
 
 		 98 bp  155  2.9999999999999998e-36  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.590935  normal  1 
 
 
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NC_010658  SbBS512_E4963  Bacterial signal recognition particle RNA  94.9 
 
 		 98 bp  155  2.9999999999999998e-36  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
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NC_011205  SeD_A0511  Bacterial signal recognition particle RNA  94.9 
 
 		 98 bp  155  2.9999999999999998e-36  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.235634  normal  1 
 
 
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NC_011080  SNSL254_A0517  Bacterial signal recognition particle RNA  94.9 
 
 		 98 bp  155  2.9999999999999998e-36  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0211514  normal  1 
 
 
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NC_011083  SeHA_C0570  Bacterial signal recognition particle RNA  94.9 
 
 		 98 bp  155  2.9999999999999998e-36  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.508215  normal  1 
 
 
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NC_011094  SeSA_A0527  Bacterial signal recognition particle RNA  94.9 
 
 		 98 bp  155  2.9999999999999998e-36  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  hitchhiker  0.00404538  normal  1 
 
 
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NC_011149  SeAg_B0508  Bacterial signal recognition particle RNA  94.9 
 
 		 98 bp  155  2.9999999999999998e-36  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00000873189  n/a   
 
 
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NC_013421  Pecwa_R0067  SRP RNA; RNA component of signal recognitionparti cle  89.62 
 
 		 117 bp  123  9.999999999999999e-27  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_009832  Spro_R0041  SRP RNA; RNA component of signal recognition particle  88.5 
 
 		 117 bp  121  3.9999999999999996e-26  Serratia proteamaculans 568  Bacteria  hitchhiker  0.0000286678  hitchhiker  0.00000116096 
 
 
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NC_012912  Dd1591_R0068  SRP RNA; RNA component of signal recognitionparti cle  87.5 
 
 		 117 bp  103  1e-20  Dickeya zeae Ech1591  Bacteria  normal  0.0668362  n/a   
 
 
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NC_009708  YpsIP31758_4322  bacterial signal recognition particle RNA  86 
 
 		 100 bp  87.7  6e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.000000116884  n/a   
 
 
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NC_010159  YpAngola_A4232  bacterial signal recognition particle RNA  86 
 
 		 100 bp  87.7  6e-16  Yersinia pestis Angola  Bacteria  normal  0.0230281  normal  0.0689063 
 
 
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NC_012880  Dd703_R0025  SRP RNA; RNA component of signal recognition particle  87.88 
 
 		 117 bp  85.7  0.000000000000002  Dickeya dadantii Ech703  Bacteria  normal  0.829287  n/a   
 
 
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NC_011312  VSAL_I3160s  Bacterial signal recognition particle RNA  91.38 
 
 		 100 bp  75.8  0.000000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
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NC_009783  VIBHAR_01455  bacterial signal recognition particle RNA  87.93 
 
 		 100 bp  60  0.0000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
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NC_007005  Psyr_RNA34  SRP RNA; RNA component of signal recognition particle  96.77 
 
 		 117 bp  54  0.000008  Pseudomonas syringae pv. syringae B728a  Bacteria  hitchhiker  0.00314643  normal  1 
 
 
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NC_009654  Mmwyl1_R0044  SRP RNA; RNA component of signal recognition particle  89.13 
 
 		 117 bp  52  0.00003  Marinomonas sp. MWYL1  Bacteria  normal  0.577692  normal  0.0469682 
 
 
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NC_009719  Plav_R0005  SRP RNA; RNA component of signal recognition particle  100 
 
 		 102 bp  48.1  0.0005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
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NC_007802  Jann_R0045  SRP RNA; RNA component of signal recognition particle  100 
 
 		 101 bp  48.1  0.0005  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.265338 
 
 
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NC_013739  Cwoe_R0042  SRP RNA; RNA component of signal recognitionparti cle  96.43 
 
 		 91 bp  48.1  0.0005  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
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NC_008639  Cpha266_R0055  SRP RNA; RNA component of signal recognition particle  96.3 
 
 		 106 bp  46.1  0.002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
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NC_010718  Nther_R0012    100 
 
 		 103 bp  44.1  0.008  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000174989  normal  1 
 
 
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NC_012918  GM21_R0005  SRP RNA; RNA component of signal recognitionparti cle  100 
 
 		 109 bp  44.1  0.008  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.3194600000000004e-26 
 
 
-
 
NC_007404  Tbd_R0014  SRP RNA; RNA component of signal recognitionparticle  93.33 
 
 		 99 bp  44.1  0.008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.243503 
 
 
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