10 homologs were found in PanDaTox collection
for query gene Cpha266_R0055 on replicon NC_008639
Organism: Chlorobium phaeobacteroides DSM 266



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008639  Cpha266_R0055  SRP RNA; RNA component of signal recognition particle  100 
 
 		 106 bp  210  5e-53  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_R0027  SRP RNA; RNA component of signal recognition particle  96.3 
 
 		 118 bp  46.1  0.002  Enterobacter sp. 638  Bacteria  normal  0.131699  normal  1 
 
 
-
 
NC_007005  Psyr_RNA34  SRP RNA; RNA component of signal recognition particle  100 
 
 		 117 bp  44.1  0.007  Pseudomonas syringae pv. syringae B728a  Bacteria  hitchhiker  0.00314643  normal  1 
 
 
-
 
NC_007802  Jann_R0045  SRP RNA; RNA component of signal recognition particle  100 
 
 		 101 bp  44.1  0.007  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.265338 
 
 
-
 
NC_009719  Plav_R0005  SRP RNA; RNA component of signal recognition particle  100 
 
 		 102 bp  44.1  0.007  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_R0041  SRP RNA; RNA component of signal recognition particle  100 
 
 		 117 bp  44.1  0.007  Serratia proteamaculans 568  Bacteria  hitchhiker  0.0000286678  hitchhiker  0.00000116096 
 
 
-
 
NC_010718  Nther_R0012    100 
 
 		 103 bp  44.1  0.007  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000174989  normal  1 
 
 
-
 
NC_011312  VSAL_I3160s  Bacterial signal recognition particle RNA  100 
 
 		 100 bp  44.1  0.007  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_R0005  SRP RNA; RNA component of signal recognitionparti cle  100 
 
 		 109 bp  44.1  0.007  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.3194600000000004e-26 
 
 
-
 
NC_013421  Pecwa_R0067  SRP RNA; RNA component of signal recognitionparti cle  100 
 
 		 117 bp  44.1  0.007  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>