16 homologs were found in PanDaTox collection
for query gene ECH74115_5720 on replicon NC_011353
Organism: Escherichia coli O157:H7 str. EC4115



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011353  ECH74115_5720  hypothetical protein  100 
 
 		 108 aa  226  1e-58  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.0717251  normal  1 
 
 
-
 
CP001509  ECD_04077  predicted transcriptional regulator  83.33 
 
 		 108 aa  90.1  1e-17  Escherichia coli BL21(DE3)  Bacteria  hitchhiker  0.000245375  n/a   
 
 
-
 
NC_012892  B21_04040  hypothetical protein  83.33 
 
 		 108 aa  90.1  1e-17  Escherichia coli BL21  Bacteria  hitchhiker  0.000184018  n/a   
 
 
-
 
NC_009800  EcHS_A4455  TetR family transcriptional regulator  81.63 
 
 		 215 aa  89  2e-17  Escherichia coli HS  Bacteria  hitchhiker  1.10893e-16  n/a   
 
 
-
 
NC_010468  EcolC_3801  TetR family transcriptional regulator  81.63 
 
 		 215 aa  89  2e-17  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.000000675626  normal  0.64863 
 
 
-
 
NC_010658  SbBS512_E4747  transcriptional regulator, TetR family  81.63 
 
 		 215 aa  89  2e-17  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.000000342659  n/a   
 
 
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NC_012892  B21_04039  hypothetical protein  81.63 
 
 		 215 aa  88.6  2e-17  Escherichia coli BL21  Bacteria  hitchhiker  0.000282396  n/a   
 
 
-
 
NC_009801  EcE24377A_4773  TetR family transcriptional regulator  61.22 
 
 		 212 aa  70.5  0.000000000007  Escherichia coli E24377A  Bacteria  hitchhiker  0.00000000164473  n/a   
 
 
-
 
NC_010498  EcSMS35_4682  TetR family transcriptional regulator  59.18 
 
 		 212 aa  67  0.00000000009  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.00000014918  normal  1 
 
 
-
 
NC_009636  Smed_3330  TetR family transcriptional regulator  46.34 
 
 		 225 aa  48.5  0.00003  Sinorhizobium medicae WSM419  Bacteria  normal  0.648103  normal  0.907597 
 
 
-
 
NC_011894  Mnod_3413  transcriptional regulator, TetR family  29.47 
 
 		 246 aa  47.8  0.00005  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011369  Rleg2_4014  transcriptional regulator, TetR family  43.9 
 
 		 225 aa  41.6  0.003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_4343  transcriptional regulator, TetR family  43.9 
 
 		 225 aa  42  0.003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0349599  decreased coverage  0.000000750918 
 
 
-
 
NC_012791  Vapar_1864  transcriptional regulator, TetR family  28.79 
 
 		 218 aa  40.4  0.008  Variovorax paradoxus S110  Bacteria  normal  0.796207  n/a   
 
 
-
 
NC_011365  Gdia_2226  transcriptional regulator, TetR family  44.44 
 
 		 223 aa  40.4  0.009  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.407434  normal  1 
 
 
-
 
NC_008786  Veis_0622  TetR family transcriptional regulator  39.02 
 
 		 216 aa  40  0.01  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
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