Gene EcHS_A4455 details

Gene Information

• Locus tag: EcHS_A4455
• ID: 5592847
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 4460540
• End bp: 4461187
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640923553
• Product: TetR family transcriptional regulator
• Protein accession: YP_001460994
• Protein GI: 157163676
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1.10893e-16
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATCTTG ATACCAGCAA CGTACAGAGC CTGAAGGAAA AGCTGCTGTT ATGCGCGGTT 
AATGAATTTG CCGAATATGG TTATGAAGGG GCCAGGGTCG ATAATATTGT TAAGGCTGCG 
GGGTGTAGTA AACAGACGGT TTATCATCAC TTTGGTAATA AAGAAAATTT ATTTATTGAA 
GTACTGGAAT ATACCTGGAA CGATATTCGA CAAAAAGAAA AGGCCCTTGA TTTCTCAGAT 
CTTCCGCCAC AAAAAGCTAT TGAGAAAATT ATTGATTTTA CATGGGATTA TTATATTGCT 
AACCCCTGGT TTTTAAAAAT TGTGCATAGT GAAAATCAAA GTAAAGGTGT GCATTATGCA 
AAATCACAGC GTCTCTTAGA AATTAACCAT GCGCACTTGC AGTTAATGGA ATCCTTATTG 
GATGAAGGGA AGAAACACAA TATTTTTAAG CCAGATATCG ACCCATTGCA GGTGAATATT 
AATATTGCTG CGCTTGGGGG ATATTATTTG ATCAACCAGC ATACGCTTGG CCTGGTTTAT 
CATATCAGTA TGGTTTCCCC CCAGGCACTG GAAGCCAGAC GTAAGGTCAT CAAAGAGACA 
ATCCTTAGCT GGCTTTTGGT TGACCCTTCA TCTACCGCGC ACGAATAA 

 

Protein sequence

MYLDTSNVQS LKEKLLLCAV NEFAEYGYEG ARVDNIVKAA GCSKQTVYHH FGNKENLFIE 
VLEYTWNDIR QKEKALDFSD LPPQKAIEKI IDFTWDYYIA NPWFLKIVHS ENQSKGVHYA 
KSQRLLEINH AHLQLMESLL DEGKKHNIFK PDIDPLQVNI NIAALGGYYL INQHTLGLVY 
HISMVSPQAL EARRKVIKET ILSWLLVDPS STAHE