Gene Rleg_4343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4343 
Symbol 
ID8015119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp4466701 
End bp4467378 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content62% 
IMG OID644826919 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002978122 
Protein GI241207026 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0349599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000750918 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACGACA GCGGCGAGAA CGGGGAAAAG AAAAGGTCTC GGCGCCCACC TGCCGAACGA 
ACGGCCCAAC GCGATCCGGA GCGGACGCGC GCCGCGATCC TTGACGCGGC AACCCGGGAA
TTTGCCGAAA ACGGCATGGG CGGGGCTCGT GTCGACGCCA TCGCCGAGCG CGCCGGCACC
AACAAGCGCA TGCTCTATCA TTATTTCGGC GACAAGGAGC AGCTCTACCT CAGAGTGCTC
GAAGAGGCCT ATGTCGGCAT CCGGACCGCC GAACGCGCGC TGCATATCGG CGACCGCAGC
CCCGAGGAAG GCATCGGCGA ACTGGCGCTC TTCACCTGGC GTTACTTCCT CCAGCATCCG
GAATTCCTCA GCCTGCTCGG CACGGAAAAT CTGCATCGGG CCCGCTGGCT GCGCCAGTCC
GTCCGGCTCA AGGAATTGCA TTCGCATTTG ATCGGCGAGC TTTCGGACGT GCTCGAGCGG
GGAAAGAAGC AGGGCGTCTT CATCGAGACC GCCGATCCCT TGCATGTCTA CCTGACGATC
GCGTCGCTCG GTTATTTCTA CCTGTCCAAC CAGTACACGC TTTCGACGAT CTTCGGCCGC
GATCTGATCG AGCCGACCCA TCTCAATGCC TGGGAAAGGC ATATCGTCCA CGTGACGCTG
ACCTCGATCA AGCGCTAG
 
Protein sequence
MNDSGENGEK KRSRRPPAER TAQRDPERTR AAILDAATRE FAENGMGGAR VDAIAERAGT 
NKRMLYHYFG DKEQLYLRVL EEAYVGIRTA ERALHIGDRS PEEGIGELAL FTWRYFLQHP
EFLSLLGTEN LHRARWLRQS VRLKELHSHL IGELSDVLER GKKQGVFIET ADPLHVYLTI
ASLGYFYLSN QYTLSTIFGR DLIEPTHLNA WERHIVHVTL TSIKR