Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_4343 |
Symbol | |
ID | 8015119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 4466701 |
End bp | 4467378 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644826919 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002978122 |
Protein GI | 241207026 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0349599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000000750918 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACGACA GCGGCGAGAA CGGGGAAAAG AAAAGGTCTC GGCGCCCACC TGCCGAACGA ACGGCCCAAC GCGATCCGGA GCGGACGCGC GCCGCGATCC TTGACGCGGC AACCCGGGAA TTTGCCGAAA ACGGCATGGG CGGGGCTCGT GTCGACGCCA TCGCCGAGCG CGCCGGCACC AACAAGCGCA TGCTCTATCA TTATTTCGGC GACAAGGAGC AGCTCTACCT CAGAGTGCTC GAAGAGGCCT ATGTCGGCAT CCGGACCGCC GAACGCGCGC TGCATATCGG CGACCGCAGC CCCGAGGAAG GCATCGGCGA ACTGGCGCTC TTCACCTGGC GTTACTTCCT CCAGCATCCG GAATTCCTCA GCCTGCTCGG CACGGAAAAT CTGCATCGGG CCCGCTGGCT GCGCCAGTCC GTCCGGCTCA AGGAATTGCA TTCGCATTTG ATCGGCGAGC TTTCGGACGT GCTCGAGCGG GGAAAGAAGC AGGGCGTCTT CATCGAGACC GCCGATCCCT TGCATGTCTA CCTGACGATC GCGTCGCTCG GTTATTTCTA CCTGTCCAAC CAGTACACGC TTTCGACGAT CTTCGGCCGC GATCTGATCG AGCCGACCCA TCTCAATGCC TGGGAAAGGC ATATCGTCCA CGTGACGCTG ACCTCGATCA AGCGCTAG
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Protein sequence | MNDSGENGEK KRSRRPPAER TAQRDPERTR AAILDAATRE FAENGMGGAR VDAIAERAGT NKRMLYHYFG DKEQLYLRVL EEAYVGIRTA ERALHIGDRS PEEGIGELAL FTWRYFLQHP EFLSLLGTEN LHRARWLRQS VRLKELHSHL IGELSDVLER GKKQGVFIET ADPLHVYLTI ASLGYFYLSN QYTLSTIFGR DLIEPTHLNA WERHIVHVTL TSIKR
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