11 homologs were found in PanDaTox collection
for query gene DvMF_0179 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_0179  hypothetical protein  100 
 
 
283 aa  564  1e-160  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.00590711 
 
 
-
 
NC_011769  DvMF_0180  hypothetical protein  42.49 
 
 
294 aa  153  2e-36  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.00176526 
 
 
-
 
NC_013173  Dbac_2973  ABC transporter, periplasmic substrate-binding protein, putative  24.88 
 
 
251 aa  63.5  0.000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_2848  extracellular solute-binding protein  36.36 
 
 
261 aa  48.5  0.0001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0787958  n/a   
 
 
-
 
NC_009668  Oant_3496  extracellular solute-binding protein  32.26 
 
 
258 aa  46.2  0.0006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2588  extracellular solute-binding protein  28.22 
 
 
270 aa  44.3  0.003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4772  extracellular solute-binding protein  32.74 
 
 
266 aa  43.1  0.004  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0836  ABC amino acid transporter, periplasmic ligand binding protein  31.86 
 
 
266 aa  43.1  0.005  Burkholderia sp. 383  Bacteria  normal  normal  0.0996489 
 
 
-
 
NC_007951  Bxe_A1500  ABC polar amino acid transporter, periplasmic ligand binding protein  21.78 
 
 
270 aa  42.7  0.007  Burkholderia xenovorans LB400  Bacteria  normal  0.238692  normal  0.502241 
 
 
-
 
NC_011769  DvMF_1176  extracellular solute-binding protein family 3  29.34 
 
 
312 aa  42.4  0.008  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.975063 
 
 
-
 
NC_009975  MmarC6_0013  extracellular solute-binding protein  23.94 
 
 
253 aa  42.4  0.009  Methanococcus maripaludis C6  Archaea  normal  0.126244  n/a   
 
 
-
 
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