Gene DvMF_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0179 
Symbol 
ID7172055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp195652 
End bp196503 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content69% 
IMG OID643538673 
Producthypothetical protein 
Protein accessionYP_002434607 
Protein GI218885286 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR02285] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.00590711 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCCAC ACCGCGTCCG GCCCCATGCC TGGCCCCGTT CCTTCTGTGC CTGCCTGCGC 
CCGCTGGGCA TCCTGCTGCT TGTGCTGGGC GCCAGCGCCG CACCGTTGCG CCCGGTCCTT
GCCACCACAT CCGCCCCGGC GCCGCGCGAA ATCACCGTGT ACGTCTACCA CCGCCCGCCG
TTCTTCACGG CAACCCCGGA AAGCCAGGGC GGGCCACTGG TGGAAATGAC CCTGATCGCG
CTGGAGCGCG CGGACCTGAA GCCTCGCCTT GTCACCAGCA CCTTCACCGA AATCCTCGCC
ACGTTCCGTG CAGGCGCCCC CTTCGCCTGC GTGCCCGGTG TCTACCGCAC GCCGGAGCGC
GAGTCCTTCG CCCGCTTCAG CGGCCCGCTG TATGTTCCGC TGCCGCCGGT AATCGTGGTG
CGCCGCGCCG ATGCGGGGCT TGCCGCCTCC GCCCGGTCCC TCGATTCGCT GCTGGCGGGA
GGGCTGCGCG TGGTGCTGGG GGACGGCTAC TGGTACGGCG GCTGGCTGGC GCAGGCGCTG
CAGCGTACCG GCACTTCGCC CACCCGCACC CGCCAAGAAA ATGCCCTGAT GCTGCGGTCC
ATCGTGGACG GCACCCACGA CATCTCCTTC ATGAGCCATG AAGAGGCGGC CCACCTGCTG
CGCACCCACC CGGACCTTGG GACGAACCTG ACCTTGCGCC CGGTGCCGGG CAACCCGGTT
GGTGACTCGC GCTACCTGAT GCTGGCGAAA GGGGTGGACG CCGCAACGGT CGCACGCATT
GACATGGCCC TGCGCGAACT GGCGGAAACA CCACGCTACC GCGAACTGGT GCGGTCGTTG
CACCACGAAT GA
 
Protein sequence
MAPHRVRPHA WPRSFCACLR PLGILLLVLG ASAAPLRPVL ATTSAPAPRE ITVYVYHRPP 
FFTATPESQG GPLVEMTLIA LERADLKPRL VTSTFTEILA TFRAGAPFAC VPGVYRTPER
ESFARFSGPL YVPLPPVIVV RRADAGLAAS ARSLDSLLAG GLRVVLGDGY WYGGWLAQAL
QRTGTSPTRT RQENALMLRS IVDGTHDISF MSHEEAAHLL RTHPDLGTNL TLRPVPGNPV
GDSRYLMLAK GVDAATVARI DMALRELAET PRYRELVRSL HHE