Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0179 |
Symbol | |
ID | 7172055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 195652 |
End bp | 196503 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643538673 |
Product | hypothetical protein |
Protein accession | YP_002434607 |
Protein GI | 218885286 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR02285] conserved hypothetical protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 0.00590711 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCCCCAC ACCGCGTCCG GCCCCATGCC TGGCCCCGTT CCTTCTGTGC CTGCCTGCGC CCGCTGGGCA TCCTGCTGCT TGTGCTGGGC GCCAGCGCCG CACCGTTGCG CCCGGTCCTT GCCACCACAT CCGCCCCGGC GCCGCGCGAA ATCACCGTGT ACGTCTACCA CCGCCCGCCG TTCTTCACGG CAACCCCGGA AAGCCAGGGC GGGCCACTGG TGGAAATGAC CCTGATCGCG CTGGAGCGCG CGGACCTGAA GCCTCGCCTT GTCACCAGCA CCTTCACCGA AATCCTCGCC ACGTTCCGTG CAGGCGCCCC CTTCGCCTGC GTGCCCGGTG TCTACCGCAC GCCGGAGCGC GAGTCCTTCG CCCGCTTCAG CGGCCCGCTG TATGTTCCGC TGCCGCCGGT AATCGTGGTG CGCCGCGCCG ATGCGGGGCT TGCCGCCTCC GCCCGGTCCC TCGATTCGCT GCTGGCGGGA GGGCTGCGCG TGGTGCTGGG GGACGGCTAC TGGTACGGCG GCTGGCTGGC GCAGGCGCTG CAGCGTACCG GCACTTCGCC CACCCGCACC CGCCAAGAAA ATGCCCTGAT GCTGCGGTCC ATCGTGGACG GCACCCACGA CATCTCCTTC ATGAGCCATG AAGAGGCGGC CCACCTGCTG CGCACCCACC CGGACCTTGG GACGAACCTG ACCTTGCGCC CGGTGCCGGG CAACCCGGTT GGTGACTCGC GCTACCTGAT GCTGGCGAAA GGGGTGGACG CCGCAACGGT CGCACGCATT GACATGGCCC TGCGCGAACT GGCGGAAACA CCACGCTACC GCGAACTGGT GCGGTCGTTG CACCACGAAT GA
|
Protein sequence | MAPHRVRPHA WPRSFCACLR PLGILLLVLG ASAAPLRPVL ATTSAPAPRE ITVYVYHRPP FFTATPESQG GPLVEMTLIA LERADLKPRL VTSTFTEILA TFRAGAPFAC VPGVYRTPER ESFARFSGPL YVPLPPVIVV RRADAGLAAS ARSLDSLLAG GLRVVLGDGY WYGGWLAQAL QRTGTSPTRT RQENALMLRS IVDGTHDISF MSHEEAAHLL RTHPDLGTNL TLRPVPGNPV GDSRYLMLAK GVDAATVARI DMALRELAET PRYRELVRSL HHE
|
| |