7 homologs were found in PanDaTox collection
for query gene Dshi_3639 on replicon NC_009955
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009955  Dshi_3639  conjugal transfer protein TrbC  100 
 
 		 97 aa  181  4.0000000000000006e-45  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.22412 
 
 
-
 
NC_009957  Dshi_3974  conjugal transfer protein TrbC  98.97 
 
 		 97 aa  178  2e-44  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  n/a   
 
 
-
 
NC_008042  TM1040_3821  VIRB2 type IV secretion  95.88 
 
 		 97 aa  174  3e-43  Ruegeria sp. TM1040  Bacteria  normal  0.454971  normal  0.0306094 
 
 
-
 
NC_009475  BBta_p0257  Type IV secretory pathway AvhB2 protein  41.56 
 
 		 98 aa  57  0.00000008  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  1 
 
 
-
 
NC_009717  Xaut_5088  VIRB2 type IV secretion fmaily protein  39.24 
 
 		 100 aa  52.4  0.000002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_0675  VIRB2 type IV secretion fmaily protein  39.73 
 
 		 99 aa  50.1  0.00001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008242  Meso_4348  VIRB2 type IV secretion  38.27 
 
 		 99 aa  43.5  0.001  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
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