| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3974 |
|---|
| Symbol | |
|---|
| ID | 5714503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009957 |
|---|
| Strand | + |
|---|
| Start bp | 34146 |
|---|
| End bp | 34439 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641276887 |
|---|
| Product | conjugal transfer protein TrbC |
|---|
| Protein accession | YP_001542183 |
|---|
| Protein GI | 159046513 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAGA TTTCAAACCT CTTTGTCGCC TCACTGGCGC TATTCCTGCT CATTGCCGAG
CCCGCCCTTG CCCAAAGCAT CGATCTATCC CCGATCCAAA GCTTGTTGCA GGGCATTGTC
GATGCTCTAA CCGGCCCGCT CGGCGTCGTG ATCGCCACAC TCGCGGTCCT TGGCGTTTTC
TTGAGCTGGT TCTTCAATAT CATCGATCTG CGTCAGGCGC TCTGGGTCCT CGTCGGGATC
GCTGGTGTTG CGGCCGCTCC CACCATCGTC GCCGCGGTTT TCGCCGGTGG CTGA
|
|---|
| Protein sequence | MRQISNLFVA SLALFLLIAE PALAQSIDLS PIQSLLQGIV DALTGPLGVV IATLAVLGVF
LSWFFNIIDL RQALWVLVGI AGVAAAPTIV AAVFAGG
|
|---|
| |