Gene Dshi_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3639 
Symbol 
ID5714169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp39794 
End bp40087 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content61% 
IMG OID641276557 
Productconjugal transfer protein TrbC 
Protein accessionYP_001541853 
Protein GI159046181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.22412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAGA TTTCAAACCT CTTTGTCGCC TCGCTGGCGC TATTCCTGTT CATTGCCGAG 
CCCGCCCTTG CACAGAGCAT CGATCTCTCC CCGATCCAGA GCTTGTTACA GGGCATTGTC
GATGCGCTGA CCGGACCCCT TGGTGTGGTC ATCGCCACAC TCGCGGTCCT CGGCGTTTTC
TTGAGCTGGT TCTTCAACAT CATCGACCTG CGCCAAGCGC TTTGGGTCCT CGTGGGCATC
GCCGGTGTCG CGGCCGCCCC CACCATCGTT GCCGCGGTCT TTGCCGGTGG CTGA
 
Protein sequence
MRQISNLFVA SLALFLFIAE PALAQSIDLS PIQSLLQGIV DALTGPLGVV IATLAVLGVF 
LSWFFNIIDL RQALWVLVGI AGVAAAPTIV AAVFAGG