19 homologs were found in PanDaTox collection
for query gene Dshi_3541 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_3541  putative photosynthetic complex assembly protein  100 
 
 		 225 aa  463  9.999999999999999e-131  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007802  Jann_0154  photosynthetic complex assembly protein  54.19 
 
 		 216 aa  224  6e-58  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_1003  hypothetical protein  51.32 
 
 		 212 aa  197  1.0000000000000001e-49  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.792862 
 
 
-
 
NC_009049  Rsph17029_1935  hypothetical protein  49.21 
 
 		 214 aa  197  1.0000000000000001e-49  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0292  hypothetical protein  48.68 
 
 		 214 aa  195  4.0000000000000005e-49  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.588521  n/a   
 
 
-
 
NC_008789  Hhal_1630  hypothetical protein  43.23 
 
 		 212 aa  172  3.9999999999999995e-42  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_2035  photosynthetic complex assembly protein  44.74 
 
 		 232 aa  165  6.9999999999999995e-40  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007643  Rru_A0616  photosynthetic complex assembly protein  42.63 
 
 		 224 aa  140  1.9999999999999998e-32  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.17866  n/a   
 
 
-
 
NC_011004  Rpal_1737  putative photosynthetic complex assembly protein  36.27 
 
 		 220 aa  126  3e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_3729  putative photosynthetic complex assembly protein  36.31 
 
 		 220 aa  120  1.9999999999999998e-26  Rhodopseudomonas palustris BisB5  Bacteria  hitchhiker  0.00156993  hitchhiker  0.00368888 
 
 
-
 
NC_007925  RPC_1320  photosynthetic complex assembly protein  37.64 
 
 		 220 aa  118  9e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.562837  normal  0.156317 
 
 
-
 
NC_009485  BBta_6410  hypothetical protein  37.85 
 
 		 216 aa  117  9.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_3974  photosynthetic complex assembly protein  34.97 
 
 		 220 aa  114  7.999999999999999e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0728012  normal  0.262812 
 
 
-
 
NC_010172  Mext_4809  putative photosynthetic complex assembly protein  37.17 
 
 		 234 aa  112  5e-24  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.0799721 
 
 
-
 
NC_011757  Mchl_5276  putative photosynthetic complex assembly protein  39.67 
 
 		 238 aa  109  3e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_5354  putative photosynthetic complex assembly protein  39.18 
 
 		 227 aa  108  8.000000000000001e-23  Methylobacterium populi BJ001  Bacteria  normal  0.457563  normal  1 
 
 
-
 
NC_010511  M446_3725  putative photosynthetic complex assembly protein  38.75 
 
 		 223 aa  106  3e-22  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0514365 
 
 
-
 
NC_010505  Mrad2831_1841  putative photosynthetic complex assembly protein  36.31 
 
 		 216 aa  102  4e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0719719 
 
 
-
 
NC_007777  Francci3_0702  membrane-flanked domain-containing protein  27.59 
 
 		 169 aa  44.7  0.001  Frankia sp. CcI3  Bacteria  normal  1  normal  0.654587 
 
 
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