18 homologs were found in PanDaTox collection
for query gene Dshi_3512 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009952  Dshi_3512  hydroxyneurosporene dehydrogenase  100 
 
 		 252 aa  512  1e-144  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.411163  normal  0.914235 
 
 
-
 
NC_007802  Jann_0184  hydroxyneurosporene synthase  64.14 
 
 		 240 aa  326  2.0000000000000001e-88  Jannaschia sp. CCS1  Bacteria  normal  0.7318  normal  1 
 
 
-
 
NC_009428  Rsph17025_2041  hydroxyneurosporene synthase  62.06 
 
 		 281 aa  313  1.9999999999999998e-84  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.42927 
 
 
-
 
NC_007493  RSP_0267  hydroxyneurosporene synthase  61.51 
 
 		 279 aa  313  1.9999999999999998e-84  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_1911  hydroxyneurosporene synthase  61.11 
 
 		 279 aa  311  4.999999999999999e-84  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.581622 
 
 
-
 
NC_007925  RPC_1288  hydroxyneurosporene synthase  43.1 
 
 		 319 aa  201  7e-51  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.368952  normal  1 
 
 
-
 
NC_007643  Rru_A2985  hydroxyneurosporene synthase  42.5 
 
 		 253 aa  197  1.0000000000000001e-49  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.813569  n/a   
 
 
-
 
NC_010511  M446_3692  hydroxyneurosporene synthase  41.39 
 
 		 297 aa  190  2e-47  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00263828 
 
 
-
 
NC_011004  Rpal_1705  hydroxyneurosporene synthase  42.26 
 
 		 317 aa  185  7e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_6442  hydroxyneurosporene synthase  40.82 
 
 		 404 aa  183  2.0000000000000003e-45  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_3761  hydroxyneurosporene synthase  40.5 
 
 		 317 aa  182  4.0000000000000006e-45  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  hitchhiker  0.00499393 
 
 
-
 
NC_011666  Msil_2047  hydroxyneurosporene synthase  38.78 
 
 		 283 aa  178  9e-44  Methylocella silvestris BL2  Bacteria  n/a    normal  0.329916 
 
 
-
 
NC_007778  RPB_4006  hydroxyneurosporene synthase  40.08 
 
 		 317 aa  176  3e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  hitchhiker  0.00208481 
 
 
-
 
NC_010172  Mext_2725  hydroxyneurosporene synthase  41.25 
 
 		 300 aa  172  2.9999999999999996e-42  Methylobacterium extorquens PA1  Bacteria  normal  0.50552  normal  1 
 
 
-
 
NC_010505  Mrad2831_2823  hydroxyneurosporene synthase  40.41 
 
 		 286 aa  173  2.9999999999999996e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.467897  normal  0.293634 
 
 
-
 
NC_011757  Mchl_2952  hydroxyneurosporene synthase  41.25 
 
 		 299 aa  172  2.9999999999999996e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  hitchhiker  0.00707187 
 
 
-
 
NC_010725  Mpop_2847  hydroxyneurosporene synthase  40.42 
 
 		 286 aa  165  8e-40  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.724787 
 
 
-
 
NC_008789  Hhal_1615  hydroxyneurosporene synthase  36.03 
 
 		 275 aa  160  2e-38  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>