9 homologs were found in PanDaTox collection
for query gene Dret_0390 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013223  Dret_0390  transcriptional regulator, XRE family  100 
 
 		 135 aa  283  5e-76  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.116941  normal  0.945426 
 
 
-
 
NC_010483  TRQ2_1496  XRE family transcriptional regulator  30.48 
 
 		 110 aa  44.3  0.0005  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009486  Tpet_1451  helix-turn-helix domain-containing protein  31.58 
 
 		 127 aa  43.9  0.0007  Thermotoga petrophila RKU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_1498  hypothetical protein  44.07 
 
 		 74 aa  41.6  0.004  Pelobacter propionicus DSM 2379  Bacteria  normal  0.743357  n/a   
 
 
-
 
NC_007644  Moth_0364  XRE family transcriptional regulator  34.33 
 
 		 100 aa  40.8  0.006  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000740846  normal  1 
 
 
-
 
NC_008554  Sfum_0490  Fis family transcriptional regulator  35.48 
 
 		 176 aa  40.8  0.006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.100624 
 
 
-
 
NC_008346  Swol_1542  hypothetical protein  25.61 
 
 		 102 aa  40.8  0.007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_010508  Bcenmc03_1199  XRE family transcriptional regulator  34.09 
 
 		 93 aa  40.8  0.007  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0441621  normal  0.644581 
 
 
-
 
NC_013132  Cpin_4943  transcriptional regulator, XRE family  38.6 
 
 		 82 aa  40.4  0.008  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.358741  normal  0.505342 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>