Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0390 |
Symbol | |
ID | 8418195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 478589 |
End bp | 478996 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 645036954 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003197268 |
Protein GI | 258404526 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.116941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.945426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGG ACAATGAATA CAGCGGTGTG ATCGACGGCA TTTTTTCGCA GATCTCTGAG CAGGAAATGC AGTATGAAGA ATTGCTGCAT ACTGTTTCGG AAGAAATCAA TAGGATTATG TGCAAAGAAG GCCTGACGAA AGCGGAGCTG GCTGACAAGA TGGGCGTTTC CAGGCCGTAT ATAACAAAAT TGCTTCGCGG GACGAACGTG AGCTTGCAGA CCCTGGCCAA GGTTGCATCT GCTTTGGGAT ACAAAACGTG TATTTCCATG ATCCCCAAGC ATTGGGAAGC GCGGGTTTTT GCTGTATCCC CTGTGAATAA GCAGCGGCAA GGAGACCGCC GGGCGCGTTT TGCGGATGGC TTCAGGGAAA AGGAAGGATA TGCGTATGCC GGTGTTGCAA CTCGTTGA
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Protein sequence | MQTDNEYSGV IDGIFSQISE QEMQYEELLH TVSEEINRIM CKEGLTKAEL ADKMGVSRPY ITKLLRGTNV SLQTLAKVAS ALGYKTCISM IPKHWEARVF AVSPVNKQRQ GDRRARFADG FREKEGYAYA GVATR
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