Gene Dret_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0390 
Symbol 
ID8418195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp478589 
End bp478996 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content50% 
IMG OID645036954 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003197268 
Protein GI258404526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.116941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.945426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGG ACAATGAATA CAGCGGTGTG ATCGACGGCA TTTTTTCGCA GATCTCTGAG 
CAGGAAATGC AGTATGAAGA ATTGCTGCAT ACTGTTTCGG AAGAAATCAA TAGGATTATG
TGCAAAGAAG GCCTGACGAA AGCGGAGCTG GCTGACAAGA TGGGCGTTTC CAGGCCGTAT
ATAACAAAAT TGCTTCGCGG GACGAACGTG AGCTTGCAGA CCCTGGCCAA GGTTGCATCT
GCTTTGGGAT ACAAAACGTG TATTTCCATG ATCCCCAAGC ATTGGGAAGC GCGGGTTTTT
GCTGTATCCC CTGTGAATAA GCAGCGGCAA GGAGACCGCC GGGCGCGTTT TGCGGATGGC
TTCAGGGAAA AGGAAGGATA TGCGTATGCC GGTGTTGCAA CTCGTTGA
 
Protein sequence
MQTDNEYSGV IDGIFSQISE QEMQYEELLH TVSEEINRIM CKEGLTKAEL ADKMGVSRPY 
ITKLLRGTNV SLQTLAKVAS ALGYKTCISM IPKHWEARVF AVSPVNKQRQ GDRRARFADG
FREKEGYAYA GVATR